RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Mageb2A2AHM0 380 aa18.6■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Terf1P70371 421 aa18.6■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Uspl1Q3ULM6 1089 aa18.6■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Aplp1Q03157 653 aa18.59■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Large2Q5XPT3 690 aa18.59■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Akap4Q60662 849 aa18.59■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Wwc2Q6NXJ0 1187 aa18.59■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Slc14a2Q8R4T9 930 aa18.59■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Lman1lQ8VCD3 505 aa18.59■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Sytl4Q9R0Q1 673 aa18.59■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Prr14lE9Q7C4 1971 aa18.59■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Tanc1Q0VGY8 1856 aa18.58■□□□□ 0.57
Ccdc88c-204ENSMUST00000223097 Usp17lbE9Q9U0 468 aa18.58■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Kifc2O08672 792 aa18.58■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Irf6P97431 467 aa18.58■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 IntuQ059U7 942 aa18.58■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Sp8Q8BMJ8 486 aa18.58■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Echdc1Q9D9V3 322 aa18.58■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Greb1lB9EJV3 1913 aa18.58■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Ube4aE9Q735 1028 aa18.57■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Pde4aO89084 844 aa18.57■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Il15P48346 162 aa18.57■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Ddx31Q6NZQ2 687 aaKnown RBP18.57■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Glrx3Q9CQM9 337 aa18.57■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Ddx20Q9JJY4 825 aaKnown RBP18.57■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 NrapQ80XB4 1728 aa18.57■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 1700029H14RikE9PY36 240 aa18.56■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Plcb3P51432 1234 aaKnown RBP18.56■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Mmp14P53690 582 aa18.56■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Itga6Q61739 1091 aa18.56■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Ripor2Q80U16 1078 aa18.56■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Epc2Q8C0I4 808 aa18.56■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Peak1Q69Z38 1735 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Wnt10bP48614 389 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Sox10Q04888 466 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Znf697Q569E7 569 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Secisbp2lQ6A098 1086 aaKnown RBP18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Znf18Q810A1 556 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Slc4a7Q8BTY2 1034 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Rtp1Q8C8C1 263 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Atxn3Q9CVD2 355 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Htra3Q9D236 459 aa18.55■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Exoc6bA6H5Z3 810 aa18.54■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Csrnp1P59054 583 aa18.54■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 LdhdQ7TNG8 484 aa18.54■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 MsraQ9D6Y7 233 aa18.54■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Acsl1P41216 699 aa18.53■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Cyp4f37Q3V1F1 546 aa18.53■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Kbtbd13Q8C828 458 aa18.53■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Aldh1b1Q9CZS1 519 aa18.53■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Psme4Q5SSW2 1843 aa18.53■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Snrpa1P57784 255 aaKnown RBP18.52■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Q3UK37 420 aa18.52■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Tfcp2l1Q3UNW5 479 aa18.52■□□□□ 0.56
Ccdc88c-204ENSMUST00000223097 Znf496Q5SXI5 585 aa18.51■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Bms1Q6PGF5 1284 aaKnown RBP18.51■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 WdpcpQ8C456 722 aa18.51■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Hdac9Q99N13 588 aa18.51■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Lmbr1lQ9D1E5 489 aa18.51■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Ly6dP35459 127 aa18.5■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Gpr37l1Q99JG2 481 aa18.5■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Bcs1lQ9CZP5 418 aa18.5■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Rbm25B2RY56 838 aaKnown RBP18.49■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Cntnap3E9PY62 1287 aa18.49■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Zscan21Q07231 555 aa18.49■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Ccdc51Q3URS9 406 aa18.49■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Nell2Q61220 819 aa18.49■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Mxd3Q80US8 206 aa18.49■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Sez6lQ6P1D5 963 aa18.48■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Trpv1Q704Y3 839 aa18.48■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Sv2bQ8BG39 683 aa18.48■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Exoc6Q8R313 802 aa18.48■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Tgm5Q9D7I9 724 aa18.48■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Gtf2iQ9ESZ8 998 aaKnown RBP18.48■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Prkg1P0C605 671 aa18.47■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Serpinb2P12388 415 aa18.47■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 B230104I21RikQ3USW4 141 aa18.47■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Rbbp6P97868 1790 aaKnown RBP18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 MycnP03966 462 aaKnown RBP18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Clul1Q3ZRW6 464 aa18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Nol10Q5RJG1 687 aaKnown RBP18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Tmem143Q8VD26 458 aa18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Mrpl12Q9DB15 201 aaKnown RBP18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Dclk1Q9JLM8 756 aa18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 S1pr4Q9Z0L1 386 aa18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Zbtb12Q9Z150 459 aa18.46■□□□□ 0.55
Ccdc88c-204ENSMUST00000223097 Fgl2P12804 432 aa18.45■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Trmt1Q3TX08 663 aa18.45■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Fchsd1Q6PFY1 688 aa18.45■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Ofd1Q80Z25 1017 aa18.45■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Tmem79Q9D709 391 aa18.45■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 B3galt4Q9Z0F0 371 aa18.45■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Ttc21aQ8C0S4 1314 aa18.45■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Spryd7Q3TFQ1 196 aa18.44■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 EspnlQ3UYR4 1005 aa18.44■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Ifi207E9Q3L4 978 aa18.43■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Map3k13Q1HKZ5 959 aa18.43■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Slc38a10Q5I012 1090 aa18.43■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Neurod2Q62414 383 aa18.43■□□□□ 0.54
Ccdc88c-204ENSMUST00000223097 Zbtb3Q91X45 518 aa18.43■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms