RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 VeztQ3ZK22 780 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Asic4Q7TNS7 539 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Stac3Q8BZ71 360 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Lrrc2Q8VDB8 371 aa19.04■□□□□ 0.64
Trim28-201ENSMUST00000005705 Ap5z1Q3U829 807 aa19.03■□□□□ 0.64
Trim28-201ENSMUST00000005705 Zfp113Q8C689 439 aa19.03■□□□□ 0.64
Trim28-201ENSMUST00000005705 Phkg2Q9DB30 406 aa19.03■□□□□ 0.64
Trim28-201ENSMUST00000005705 Abcc4E9Q236 1325 aa19.03■□□□□ 0.64
Trim28-201ENSMUST00000005705 Sp8Q8BMJ8 486 aa19.02■□□□□ 0.64
Trim28-201ENSMUST00000005705 Tmem67Q8BR76 992 aa19.02■□□□□ 0.64
Trim28-201ENSMUST00000005705 Rps6kb1Q8BSK8 525 aa19.02■□□□□ 0.64
Trim28-201ENSMUST00000005705 GptQ8QZR5 496 aa19.02■□□□□ 0.64
Trim28-201ENSMUST00000005705 Myl10Q62082 202 aa19.02■□□□□ 0.64
Trim28-201ENSMUST00000005705 Hook1Q8BIL5 728 aa19.02■□□□□ 0.63
Trim28-201ENSMUST00000005705 Efcab2Q9CQ46 164 aa19.02■□□□□ 0.63
Trim28-201ENSMUST00000005705 Sil1Q9EPK6 465 aa19.02■□□□□ 0.63
Trim28-201ENSMUST00000005705 Ncoa5Q91W39 579 aaKnown RBP19.01■□□□□ 0.63
Trim28-201ENSMUST00000005705 Psma5Q9Z2U1 241 aaKnown RBP19.01■□□□□ 0.63
Trim28-201ENSMUST00000005705 Atp10bB1AWN4 1474 aa19.01■□□□□ 0.63
Trim28-201ENSMUST00000005705 Prdm1Q60636 856 aa19.01■□□□□ 0.63
Trim28-201ENSMUST00000005705 Cep57l1Q8VDS7 400 aa19.01■□□□□ 0.63
Trim28-201ENSMUST00000005705 Dnajc25A2ALW5 357 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Eef2kO08796 724 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Stat1P42225 749 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Frat1P70339 274 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Taf3Q5HZG4 932 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 TfrcQ62351 763 aaKnown RBP19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Ccz1Q8C1Y8 480 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Flt4P35917 1363 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Hmx1O70218 332 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Ppp6r1Q7TSI3 856 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Tmem119Q8R138 280 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Smim5Q8BT42 78 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Lmod1Q8BVA4 595 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Slc5a1Q8C3K6 665 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Fam114a1Q9D281 569 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Hmgn5Q9JL35 406 aa19■□□□□ 0.63
Trim28-201ENSMUST00000005705 Znf326O88291 580 aa18.99■□□□□ 0.63
Trim28-201ENSMUST00000005705 Ehd2Q8BH64 543 aa18.99■□□□□ 0.63
Trim28-201ENSMUST00000005705 Ift57Q8BXG3 429 aa18.99■□□□□ 0.63
Trim28-201ENSMUST00000005705 StrbpQ91WM1 672 aaKnown RBP18.99■□□□□ 0.63
Trim28-201ENSMUST00000005705 Ifi35Q9D8C4 286 aa18.99■□□□□ 0.63
Trim28-201ENSMUST00000005705 Bcl9Q9D219 1425 aa18.99■□□□□ 0.63
Trim28-201ENSMUST00000005705 Plcd1Q8R3B1 756 aa18.99■□□□□ 0.63
Trim28-201ENSMUST00000005705 Eif3aP23116 1344 aaKnown RBP18.99■□□□□ 0.63
Trim28-201ENSMUST00000005705 Kcna6Q61923 529 aa18.98■□□□□ 0.63
Trim28-201ENSMUST00000005705 Cyp2d10P24456 504 aa18.98■□□□□ 0.63
Trim28-201ENSMUST00000005705 Usp28Q5I043 1051 aa18.98■□□□□ 0.63
Trim28-201ENSMUST00000005705 Zfp317Q8C0Q5 607 aa18.98■□□□□ 0.63
Trim28-201ENSMUST00000005705 Tpm3P21107 285 aaKnown RBP18.98■□□□□ 0.63
Trim28-201ENSMUST00000005705 Hps3Q91VB4 1002 aa18.98■□□□□ 0.63
Trim28-201ENSMUST00000005705 Irx2P81066 474 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 Cep135Q6P5D4 1140 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 Nid2O88322 1403 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 Nfatc2ipO09130 412 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 AcrbpQ3V140 540 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 Ccdc82Q6PG04 518 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 Zfp397Q7TNK4 527 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 Syde2E9PUP1 1314 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 Simc1E9Q6E9 1354 aa18.97■□□□□ 0.63
Trim28-201ENSMUST00000005705 1700113H08RikE9Q9Q5 327 aa18.96■□□□□ 0.63
Trim28-201ENSMUST00000005705 L1td1Q587J6 782 aaKnown RBP18.96■□□□□ 0.63
Trim28-201ENSMUST00000005705 Sept12Q9D451 317 aa18.96■□□□□ 0.63
Trim28-201ENSMUST00000005705 Iqsec3Q3TES0 1195 aa18.96■□□□□ 0.63
Trim28-201ENSMUST00000005705 Robo1O89026 1612 aa18.96■□□□□ 0.63
Trim28-201ENSMUST00000005705 Dmrt2Q8BG36 561 aa18.96■□□□□ 0.63
Trim28-201ENSMUST00000005705 R3hcc1Q8BSI6 488 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 Q8BT18 775 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 Cfap58B2RW38 873 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 Sh3bp1P55194 680 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 Gas2l3Q3UWW6 683 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 HellsQ60848 821 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 Myd88P22366 296 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 RgmbQ7TQ33 436 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 Ppm1mQ8BU27 406 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 Srgap1Q91Z69 1062 aa18.95■□□□□ 0.62
Trim28-201ENSMUST00000005705 Gm45140A0A0N4SUM8 220 aa18.94■□□□□ 0.62
Trim28-201ENSMUST00000005705 Ubxn10Q8BG34 277 aa18.94■□□□□ 0.62
Trim28-201ENSMUST00000005705 Tlcd1Q99JT6 247 aa18.94■□□□□ 0.62
Trim28-201ENSMUST00000005705 MypnQ5DTJ9 1315 aa18.94■□□□□ 0.62
Trim28-201ENSMUST00000005705 Rimbp3Q3V0F0 1606 aa18.94■□□□□ 0.62
Trim28-201ENSMUST00000005705 Dync1i1O88485 628 aa18.94■□□□□ 0.62
Trim28-201ENSMUST00000005705 Zscan29E9Q5B4 869 aa18.93■□□□□ 0.62
Trim28-201ENSMUST00000005705 Abl1P00520 1123 aa18.93■□□□□ 0.62
Trim28-201ENSMUST00000005705 Kcnj4P52189 445 aa18.93■□□□□ 0.62
Trim28-201ENSMUST00000005705 4930548H24RikQ9D496 437 aa18.93■□□□□ 0.62
Trim28-201ENSMUST00000005705 Atp2b1G5E829 1220 aa18.93■□□□□ 0.62
Trim28-201ENSMUST00000005705 Cyp2d34L7N463 504 aa18.93■□□□□ 0.62
Trim28-201ENSMUST00000005705 CenpqQ9CPQ5 267 aa18.93■□□□□ 0.62
Trim28-201ENSMUST00000005705 Kcnb2A6H8H5 907 aa18.92■□□□□ 0.62
Trim28-201ENSMUST00000005705 Card10P58660 1021 aa18.92■□□□□ 0.62
Trim28-201ENSMUST00000005705 Slu7Q8BHJ9 585 aa18.92■□□□□ 0.62
Trim28-201ENSMUST00000005705 Thsd7aQ69ZU6 1645 aa18.92■□□□□ 0.62
Trim28-201ENSMUST00000005705 Sult6b1P0CC03 303 aa18.92■□□□□ 0.62
Trim28-201ENSMUST00000005705 Mb21d2Q8C525 428 aa18.92■□□□□ 0.62
Trim28-201ENSMUST00000005705 Lmtk3Q5XJV6 1424 aa18.91■□□□□ 0.62
Trim28-201ENSMUST00000005705 Acap3Q6NXL5 833 aa18.91■□□□□ 0.62
Trim28-201ENSMUST00000005705 Ripor2Q80U16 1078 aa18.91■□□□□ 0.62
Trim28-201ENSMUST00000005705 Sec62Q8BU14 398 aaKnown RBP18.91■□□□□ 0.62
Trim28-201ENSMUST00000005705 Ttc27Q8CD92 847 aa18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms