RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 MPV17P39210 176 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 ACAA2P42765 397 aaKnown RBP11.58□□□□□ -0.56
SNX1-214ENST00000625244 IDH3AP50213 366 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 BPIFB3P59826 476 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 EGR4Q05215 589 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 PGS1Q32NB8 556 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 FOXB2Q5VYV0 432 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 WBP2NLQ6ICG8 309 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 MAVSQ7Z434 540 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 MIER2Q8N344 545 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 OR1J1Q8NGS3 322 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 STK35Q8TDR2 534 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 STON2Q8WXE9 905 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 THOC1Q96FV9 657 aaKnown RBP11.58□□□□□ -0.56
SNX1-214ENST00000625244 MARS2Q96GW9 593 aaKnown RBP11.58□□□□□ -0.56
SNX1-214ENST00000625244 TXNDC15Q96J42 360 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 OR52B2Q96RD2 323 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 DUSP26Q9BV47 211 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 NANOGQ9H9S0 305 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 KIR2DS1A0A191URI9 304 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 PLSCR5A0PG75 271 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 M0R082 166 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 SNAP29O95721 258 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 HPRP00739 348 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 ADH4P08319 380 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 ALDOCP09972 364 aaKnown RBP11.57□□□□□ -0.56
SNX1-214ENST00000625244 S100A3P33764 101 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 PCBP3P57721 371 aaKnown RBP11.57□□□□□ -0.56
SNX1-214ENST00000625244 FGF12P61328 243 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 HPCAP84074 193 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 LARS2Q15031 903 aaKnown RBP11.57□□□□□ -0.56
SNX1-214ENST00000625244 SYPL1Q16563 259 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 PDCD4Q53EL6 469 aaKnown RBP11.57□□□□□ -0.56
SNX1-214ENST00000625244 SPATA46Q5T0L3 261 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 ANXA8L1Q5VT79 327 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 RIMKLAQ8IXN7 391 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 ZNF283Q8N7M2 679 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 ANKFN1Q8N957 763 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 ZNF417Q8TAU3 575 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 PNPT1Q8TCS8 783 aaKnown RBP11.57□□□□□ -0.56
SNX1-214ENST00000625244 IPCEF1Q8WWN9 437 aaPredicted RBP11.57□□□□□ -0.56
SNX1-214ENST00000625244 TESCQ96BS2 214 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 SIGLEC11Q96RL6 698 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 ZNF587Q96SQ5 575 aaPredicted RBP11.57□□□□□ -0.56
SNX1-214ENST00000625244 SH3GL3Q99963 347 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 ULBP2Q9BZM5 246 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 SLC38A1Q9H2H9 487 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 TOR3AQ9H497 397 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 RABEP2Q9H5N1 569 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 B3GAT2Q9NPZ5 323 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 MRGBPQ9NV56 204 aa11.57□□□□□ -0.56
SNX1-214ENST00000625244 LOC102725191A0A1B0GVB3 256 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 AIM2O14862 343 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 XPNPEP2O43895 674 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 FZD7O75084 574 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 SLC22A3O75751 556 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 C1QCP02747 245 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 CD55P08174 381 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 PRG2P13727 222 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 IL7RP16871 459 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 NCF2P19878 526 aaPredicted RBP11.56□□□□□ -0.56
SNX1-214ENST00000625244 RPS4Y1P22090 263 aaKnown RBP11.56□□□□□ -0.56
SNX1-214ENST00000625244 IER3P46695 156 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 NME5P56597 212 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 LRRC74AQ0VAA2 488 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 HERPUD1Q15011 391 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 TBC1D28Q2M2D7 210 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 THEM4Q5T1C6 240 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 Q6ZTK2 550 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 UEVLDQ8IX04 471 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 C11orf44Q8N8P7 122 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 ARHGDIGQ99819 225 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 EBF4Q9BQW3 602 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 MSL2Q9HCI7 577 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 ZIM2Q9NZV7 527 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 RYR1P21817 5038 aa11.56□□□□□ -0.56
SNX1-214ENST00000625244 CSMD3Q7Z407 3707 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 A0A096LPI6 279 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 CDHR4A6H8M9 788 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 MS4A18H0YCH9 400 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 TSPAN9O75954 239 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 CBLP22681 906 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 GRPRP30550 384 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 MDH2P40926 338 aaKnown RBP11.55□□□□□ -0.56
SNX1-214ENST00000625244 COPZ1P61923 177 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 UFM1P61960 85 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 GNB2P62879 340 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 GNGT1P63211 74 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 TNFAIP6P98066 277 aaPredicted RBP11.55□□□□□ -0.56
SNX1-214ENST00000625244 MS4A18Q3C1V0 323 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 NHLRC1Q6VVB1 395 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 GDPGP1Q6ZNW5 385 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 H1FNTQ75WM6 255 aaPredicted RBP11.55□□□□□ -0.56
SNX1-214ENST00000625244 PIWIL3Q7Z3Z3 882 aaKnown RBP11.55□□□□□ -0.56
SNX1-214ENST00000625244 CPLX4Q7Z7G2 160 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 ZNF440Q8IYI8 595 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 SLC22A24Q8N4F4 322 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 FITM2Q8N6M3 262 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 OR8J2Q8NGG1 315 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 OR6N1Q8NGY5 312 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms