RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SPOCK1Q08629 439 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 ZP4Q12836 540 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 GINS1Q14691 196 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 TBRG1Q3YBR2 411 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF691Q5VV52 312 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 C12orf73Q69YU5 71 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 ANKRD16Q6P6B7 361 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 LINGO2Q7L985 606 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 LRRC75AQ8NAA5 344 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 OR2T33Q8NG76 320 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 OR2M2Q96R28 347 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 APOL4Q9BPW4 351 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 EMC6Q9BV81 110 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 TSSK6Q9BXA6 273 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 GSX2Q9BZM3 304 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 NDEL1Q9GZM8 345 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 TBC1D23Q9NUY8 699 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 BAIAP2Q9UQB8 552 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 BLOC1S5-TXNDC5H3BN57 136 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 BHLHE40O14503 412 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 RNF13O43567 381 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 TRAF3IP2O43734 574 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-225ENST00000569245 CLIC3O95833 236 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 HMGN1P05114 100 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 GNAO1P09471 354 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 AQP2P41181 271 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 SH3BGRP55822 239 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-225ENST00000569245 ARF1P84077 181 aaKnown RBP12.64□□□□□ -0.39
COMMD4-225ENST00000569245 RPL18Q07020 188 aaKnown RBP12.64□□□□□ -0.39
COMMD4-225ENST00000569245 MED21Q13503 144 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 C1QTNF12Q5T7M4 302 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 TMEM236Q5W0B7 351 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 ACSM5Q6NUN0 579 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 DPY19L2P2Q6ZN68 376 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 PXKQ7Z7A4 578 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 KRTAP1-3Q8IUG1 177 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 LNX2Q8N448 690 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 SETD9Q8NE22 299 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 OR4Q3Q8NH05 313 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 MOSPD2Q8NHP6 518 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 BCL2L2Q92843 193 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-225ENST00000569245 TRMT61AQ96FX7 289 aaKnown RBP12.64□□□□□ -0.39
COMMD4-225ENST00000569245 TXNDC15Q96J42 360 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 Q96MF0 132 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 KCNS3Q9BQ31 491 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 TEX12Q9BXU0 123 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 CRLF2Q9HC73 371 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 GPR35Q9HC97 309 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 OBP2BQ9NPH6 170 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 B3GAT2Q9NPZ5 323 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 NRIP3Q9NQ35 241 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 MED29Q9NX70 200 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 TAS2R5Q9NYW4 299 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 LRCH1Q9Y2L9 728 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 ATP23Q9Y6H3 246 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 MTORP42345 2549 aa12.64□□□□□ -0.39
COMMD4-225ENST00000569245 SLC35F4A4IF30 521 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 ARPC3O15145 178 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 CD14P08571 375 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 DANCRP0C864 163 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 APEHP13798 732 aaKnown RBP12.63□□□□□ -0.39
COMMD4-225ENST00000569245 FOSL1P15407 271 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 GRK5P34947 590 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 CAPZA2P47755 286 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 FABP6P51161 128 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 CDC42P60953 191 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 ISL1P61371 349 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 CAMK2DQ13557 499 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 CEACAM16Q2WEN9 425 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 PGGHGQ32M88 737 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 ALG10Q5BKT4 473 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 CLEC12AQ5QGZ9 265 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 AGAP6Q5VW22 663 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 PRSS57Q6UWY2 283 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 C20orf196Q8IYI0 205 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 C8orf59Q8N0T1 100 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-225ENST00000569245 TMEM123Q8N131 208 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 IQCF1Q8N6M8 205 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 OR6N1Q8NGY5 312 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 TRUB1Q8WWH5 349 aaKnown RBP12.63□□□□□ -0.39
COMMD4-225ENST00000569245 IGFBPL1Q8WX77 278 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 IFT27Q9BW83 186 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 PRRG3Q9BZD7 231 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF701Q9NV72 531 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-225ENST00000569245 IL20RAQ9UHF4 553 aa12.63□□□□□ -0.39
COMMD4-225ENST00000569245 MCIDASD6RGH6 385 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 E7EQL1 145 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 RPL36A-HNRNPH2H7BZ11 118 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 IMPA2O14732 288 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 IDH3BO43837 385 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 MPZL2O60487 215 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 IFNGR1P15260 489 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 PAX1P15863 534 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 RPL4P36578 427 aaKnown RBP12.62□□□□□ -0.39
COMMD4-225ENST00000569245 CDKN1AP38936 164 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 BIDP55957 195 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 TUBA1BP68363 451 aa12.62□□□□□ -0.39
COMMD4-225ENST00000569245 TUBA4AP68366 448 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms