RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 H6PDO95479 791 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 IGKV1-16P04430 117 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 IFI30P13284 250 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 TCP1P17987 556 aaKnown RBP0.5□□□□□ -2.33
FOXN3-216ENST00000557496 ME2P23368 584 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 CYP2F1P24903 491 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 HMGB2P26583 209 aaKnown RBP0.5□□□□□ -2.33
FOXN3-216ENST00000557496 SERPINB5P36952 375 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 SYKP43405 635 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 RABIFP47224 123 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 PDZK1IP1Q13113 114 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 MESDQ14696 234 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 TMEM41BQ5BJD5 291 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 FBXW12Q6X9E4 464 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 ZNF101Q8IZC7 436 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 PUSL1Q8N0Z8 303 aaKnown RBP0.5□□□□□ -2.33
FOXN3-216ENST00000557496 SLC35G3Q8N808 338 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 MAIP1Q8WWC4 291 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 OSTF1Q92882 214 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 TMEM54Q969K7 222 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 FAM3DQ96BQ1 224 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 KCNK16Q96T55 309 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 OMDQ99983 421 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 SPXQ9BT56 116 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 RPF2Q9H7B2 306 aaKnown RBP0.5□□□□□ -2.33
FOXN3-216ENST00000557496 ELOVL3Q9HB03 270 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 PARP11Q9NR21 331 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 POLDIP2Q9Y2S7 368 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 SVILO95425 2214 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 VWDEQ8N2E2 1590 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 OR6C70A6NIJ9 312 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 MED7O43513 233 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 PRKAB2O43741 272 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 RAMP3O60896 148 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 FGF1P05230 155 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 OR8U9P0C7N5 309 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 ZNF688P0C7X2 276 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 INAFM2P0DMQ5 153 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 SLC2A5P22732 501 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 GNA11P29992 359 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 CCND2P30279 289 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 SSTR5P35346 364 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 MAS1LP35410 378 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 OPRD1P41143 372 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 RORCP51449 518 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 ZNF92Q03936 586 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 PCOTHQ58A44 107 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 RNASE13Q5GAN3 156 aaKnown RBP0.49□□□□□ -2.33
FOXN3-216ENST00000557496 DMRTC1Q5HYR2 192 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 PLET1Q6UQ28 207 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 CCDC80Q76M96 950 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 TMEM256Q8N2U0 113 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 PIFOQ8TCI5 191 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 ZNF607Q96SK3 696 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 P2RX4Q99571 388 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 ZSCAN16Q9H4T2 348 aaPredicted RBP0.49□□□□□ -2.33
FOXN3-216ENST00000557496 SLC38A10Q9HBR0 1119 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 TMOD2Q9NZR1 351 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 TIMM10BQ9Y5J6 103 aa0.49□□□□□ -2.33
FOXN3-216ENST00000557496 TICRRQ7Z2Z1 1910 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
FOXN3-216ENST00000557496 E7EQL1 145 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 LHBP01229 141 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 IGLV3-25P01717 112 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 IGHV2-5P01817 119 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 ASGR1P07306 291 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 ZNF35P13682 527 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 RPL13AP40429 203 aaKnown RBP0.48□□□□□ -2.33
FOXN3-216ENST00000557496 UGT2B15P54855 530 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 DGUOKQ16854 277 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 KCTD21Q4G0X4 260 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 ORMDL2Q53FV1 153 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 SPECC1LQ69YQ0 1117 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 BLOC1S2Q6QNY1 142 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 ZSCAN30Q86W11 494 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 ECHDC2Q86YB7 292 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 NUDCD3Q8IVD9 361 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 CENPLQ8N0S6 344 aaPredicted RBP0.48□□□□□ -2.33
FOXN3-216ENST00000557496 CXorf40BQ96DE9 158 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 MS4A4EQ96PG1 132 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 FAM111AQ96PZ2 611 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 OR8B4Q96RC9 309 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 SORT1Q99523 831 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 TIMM17AQ99595 171 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 GPA33Q99795 319 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 RARRES2Q99969 163 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 KCTD14Q9BQ13 255 aaPredicted RBP0.48□□□□□ -2.33
FOXN3-216ENST00000557496 LRRN3Q9H3W5 708 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 EXOSC4Q9NPD3 245 aaKnown RBP0.48□□□□□ -2.33
FOXN3-216ENST00000557496 C8orf17Q9NRJ1 99 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 NINJ2Q9NZG7 142 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 CGNQ9P2M7 1197 aaKnown RBP0.48□□□□□ -2.33
FOXN3-216ENST00000557496 EPS15L1Q9UBC2 864 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 RPH3ALQ9UNE2 315 aa0.48□□□□□ -2.33
FOXN3-216ENST00000557496 CHTOPQ9Y3Y2 248 aaKnown RBP0.48□□□□□ -2.33
FOXN3-216ENST00000557496 TRIP11Q15643 1979 aa0.47□□□□□ -2.33
FOXN3-216ENST00000557496 RNF103-CHMP3A0A140T963 221 aa0.47□□□□□ -2.33
FOXN3-216ENST00000557496 POLR2DO15514 142 aaKnown RBP0.47□□□□□ -2.33
FOXN3-216ENST00000557496 TOM1O60784 492 aa0.47□□□□□ -2.33
FOXN3-216ENST00000557496 SCGB2A1O75556 95 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms