RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 OPN1MW2P0DN77 364 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 OPN1MW3P0DN78 364 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 RPIAP49247 311 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 CCR8P51685 355 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 ATP1B3P54709 279 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 CXCL9Q07325 125 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 LTC4SQ16873 150 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 SLC35G1Q2M3R5 365 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GLDNQ6ZMI3 551 aaPredicted RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 ZNF584Q8IVC4 421 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GPC2Q8N158 579 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 OR8J1Q8NGP2 316 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 OR1N2Q8NGR9 330 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 PRR14Q9BWN1 585 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GPR174Q9BXC1 333 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 HMX1Q9NP08 348 aaPredicted RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 TNFRSF12AQ9NP84 129 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 EXOSC3Q9NQT5 275 aaKnown RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 ADARB2Q9NS39 739 aaKnown RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 NDRG4Q9ULP0 352 aaKnown RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 SLC22A31A6NKX4 558 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 A8MWP6 167 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 FRS3O43559 492 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 UBL3O95164 117 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 PNMTP11086 282 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GABRA5P31644 462 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 CEACAM3P40198 252 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 PBX2P40425 430 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 HERV-K104P63124 156 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 KCNIP4Q6PIL6 250 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 OR2Y1Q8NGV0 311 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 PNPLA2Q96AD5 504 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 CPEB1Q9BZB8 566 aaKnown RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 PXMP2Q9NR77 195 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 PLEKHB1Q9UF11 243 aaPredicted RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 RNF150Q9ULK6 438 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 FUT9Q9Y231 359 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 CHST2Q9Y4C5 530 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 TNS3Q68CZ2 1445 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 SNAI1O95863 264 aaPredicted RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 TBX6O95947 436 aaPredicted RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 CD37P11049 281 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 MPGP29372 298 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 HBMQ6B0K9 141 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 LMO3Q8TAP4 145 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 MRGPRDQ8TDS7 321 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GPX8Q8TED1 209 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 NANOS1Q8WY41 292 aaKnown RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 CMBLQ96DG6 245 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 C16orf58Q96GQ5 468 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 MTHFD2LQ9H903 347 aaPredicted RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 MARCH4Q9P2E8 410 aaPredicted RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 TCFL5Q9UL49 500 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GLOD5A6NK44 160 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 COLCA2A8K830 154 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 M0R1X1 148 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 NDUFV2P19404 249 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 SLC11A1P49279 550 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 PRLHRP49683 370 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 STARD6P59095 220 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 MRPS34P82930 218 aaKnown RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 M1APQ8TC57 530 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 TVP23CQ96ET8 276 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 HRASLS5Q96KN8 279 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 NPDC1Q9NQX5 325 aaPredicted RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 F5H5T6 163 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 LEFTY2O00292 366 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 TAAR5O14804 337 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 HLA-DQB2P05538 268 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 MMP16P51512 607 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 SNRPNP63162 240 aaKnown RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 BAXQ07812 192 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 PMPCAQ10713 525 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 ZNF266Q14584 549 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 KDM4DQ6B0I6 523 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 RGL4Q8IZJ4 473 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 CLDN19Q8N6F1 224 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 POP5Q969H6 163 aaKnown RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 FAM46BQ96A09 425 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 KCTD12Q96CX2 325 aaKnown RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 HMCESQ96FZ2 354 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 DOHHQ9BU89 302 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 CNOT2Q9NZN8 540 aaKnown RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 ERI3O43414 337 aaKnown RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 RHOCP08134 193 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 HTD2P86397 168 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 FOXK2Q01167 660 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 PIN1Q13526 163 aaPredicted RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 PTOV1Q86YD1 416 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 C4orf19Q8IY42 314 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 RLN3Q8WXF3 142 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 MASTLQ96GX5 879 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 WDFY2Q96P53 400 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 SIGMAR1Q99720 223 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 METTL7AQ9H8H3 244 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 SEBOXQ9HB31 216 aaPredicted RBP8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
GTF2A1-203ENST00000553612 ADAM29Q9UKF5 820 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms