RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 MFGE8Q08431 387 aaPredicted RBP14.63□□□□□ -0.07
COL4A1-204ENST00000543140 SIGLEC14Q08ET2 396 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 MFSD13AQ14CX5 517 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 NTRK2Q16620 822 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 ZFP69Q49AA0 526 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 TMPRSS12Q86WS5 348 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 LINC00346Q8IVM7 164 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 SIAH3Q8IW03 269 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 TOMM5Q8N4H5 51 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 ELP5Q8TE02 316 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 CAPSLQ8WWF8 208 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 ADAMTS14Q8WXS8 1223 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 ZC3H10Q96K80 434 aaKnown RBP14.63□□□□□ -0.07
COL4A1-204ENST00000543140 WDR54Q9H977 334 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 SDHAF3Q9NRP4 125 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 OR5V1Q9UGF6 321 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 A0A1W2PNR3 127 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 INMT-MINDY4F8WBC2 141 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 BTCP35070 178 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 DUSP3P51452 185 aaPredicted RBP14.63□□□□□ -0.07
COL4A1-204ENST00000543140 MMP15P51511 669 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 BLVRAP53004 296 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 ZFP36L1Q07352 338 aaKnown RBP14.63□□□□□ -0.07
COL4A1-204ENST00000543140 LRRTM1Q86UE6 522 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 BPHLQ86WA6 291 aaPredicted RBP14.63□□□□□ -0.07
COL4A1-204ENST00000543140 SLC7A5P1Q8MH63 180 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 ASB17Q8WXJ9 295 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 MRGPRX4Q96LA9 322 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 TRAV6A0A075B6T7 132 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 ANXA2P2A6NMY6 339 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 ORC5O43913 435 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 ANXA2P07355 339 aaKnown RBP14.62□□□□□ -0.07
COL4A1-204ENST00000543140 DAP3P51398 398 aaKnown RBP14.62□□□□□ -0.07
COL4A1-204ENST00000543140 BIDP55957 195 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 ZP4Q12836 540 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 CCDC157Q569K6 752 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 FAM198BQ6UWH4 519 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 LINGO2Q7L985 606 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF486Q96H40 463 aaPredicted RBP14.62□□□□□ -0.07
COL4A1-204ENST00000543140 NKX3-1Q99801 234 aaPredicted RBP14.62□□□□□ -0.07
COL4A1-204ENST00000543140 MRPL15Q9P015 296 aaKnown RBP14.62□□□□□ -0.07
COL4A1-204ENST00000543140 LRP12Q9Y561 859 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 A6NIZ1 184 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 KLF7O75840 302 aaPredicted RBP14.62□□□□□ -0.07
COL4A1-204ENST00000543140 GSTT2P0CG29 244 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 GSTT2BP0CG30 244 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF823P16415 610 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 MSX1P28360 303 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 SFTPDP35247 375 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 RAP1BP61224 184 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 RAP1AP62834 184 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 RPS15P62841 145 aaKnown RBP14.62□□□□□ -0.07
COL4A1-204ENST00000543140 PLA1AQ53H76 456 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 KCTD18Q6PI47 426 aaPredicted RBP14.62□□□□□ -0.07
COL4A1-204ENST00000543140 CORO6Q6QEF8 472 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 WDSUB1Q8N9V3 476 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 SLC26A10Q8NG04 563 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 OR2M3Q8NG83 312 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 OR6S1Q8NH40 331 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 SYNPRQ8TBG9 265 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 RNF128Q8TEB7 428 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 KCNK17Q96T54 332 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 SERINC1Q9NRX5 453 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 FBXL3Q9UKT7 428 aa14.62□□□□□ -0.07
COL4A1-204ENST00000543140 TRBV5-7A0A0A0MS05 114 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 IGHV1-45A0A0A0MS14 117 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 GPR171O14626 319 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 DKK1O94907 266 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 PTHLHP12272 177 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 HLA-DMAP28067 261 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 GPAT4Q86UL3 456 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 OR5B2Q96R09 309 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 CMKLR1Q99788 373 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 SLC39A1Q9NY26 324 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 NXT1Q9UKK6 140 aaKnown RBP14.61□□□□□ -0.07
COL4A1-204ENST00000543140 CHCHD2Q9Y6H1 151 aaPredicted RBP14.61□□□□□ -0.07
COL4A1-204ENST00000543140 BDP1A6H8Y1 2624 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 C9J4A7 227 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF432O94892 652 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 TRAPPC2P0DI81 140 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 TRAPPC2BP0DI82 140 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 ARSBP15848 533 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 HOXD12P35452 270 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 RIDAP52758 137 aaKnown RBP14.61□□□□□ -0.07
COL4A1-204ENST00000543140 ROM1Q03395 351 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 PLA2G7Q13093 441 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 TMEM53Q6P2H8 277 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 SLC23A3Q6PIS1 610 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 DCXRQ7Z4W1 244 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 OR4K17Q8NGC6 315 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 CREB3L1Q96BA8 519 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 POTEKPQ9BYX7 375 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 NUDT15Q9NV35 164 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 ALKBH4Q9NXW9 302 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 B3GALT5Q9Y2C3 310 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 RPH3AQ9Y2J0 694 aaPredicted RBP14.61□□□□□ -0.07
COL4A1-204ENST00000543140 HS3ST3B1Q9Y662 390 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 FREM2Q5SZK8 3169 aa14.61□□□□□ -0.07
COL4A1-204ENST00000543140 PHF3Q92576 2039 aaKnown RBP14.61□□□□□ -0.07
COL4A1-204ENST00000543140 GPR179Q6PRD1 2367 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms