RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 CDAP32320 146 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 ASCL1P50553 236 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 SLC25A1P53007 311 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 CLRN1P58418 232 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 ARF1P84077 181 aaKnown RBP9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 TMED1Q13445 227 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 STK11Q15831 433 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 GABRA6Q16445 453 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 CEACAM16Q2WEN9 425 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 THEM4Q5T1C6 240 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 SFRP5Q5T4F7 317 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 C9orf135Q5VTT2 229 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 OTPQ5XKR4 325 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 LYPD4Q6UWN0 246 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 BEND4Q6ZU67 534 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 FAM26EQ8N5C1 309 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 TCEANCQ8N8B7 351 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 WDR31Q8NA23 367 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 OR9Q1Q8NGQ5 310 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 OR6N1Q8NGY5 312 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 FGFBP3Q8TAT2 258 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 APH1BQ8WW43 257 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 BCL2L2Q92843 193 aaPredicted RBP9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 KISS1RQ969F8 398 aaPredicted RBP9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 MUS81Q96NY9 551 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 ADI1Q9BV57 179 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 ULBP2Q9BZM5 246 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 RBM38Q9H0Z9 239 aaKnown RBP9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 RPRD1BQ9NQG5 326 aaKnown RBP9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 COQ3Q9NZJ6 369 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 ENOPH1Q9UHY7 261 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 KLHL21Q9UJP4 597 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 DOPEY2Q9Y3R5 2298 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 HCFC1P51610 2035 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 CCDC182A6NF36 153 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 FAM171A2A8MVW0 826 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF99A8MXY4 864 aaPredicted RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 XKRYO14609 159 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 TLX2O43763 284 aaPredicted RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 SLC16A7O60669 478 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 LYZL6O75951 148 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 SEC14L2O76054 403 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 AGFG2O95081 481 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 TNFAIP8O95379 198 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 CLDN1O95832 211 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 TFP02787 698 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 TFAP2AP05549 437 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 THBDP07204 575 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 SPI1P17947 270 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 PYCR1P32322 319 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 UGT2B10P36537 528 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 CD79BP40259 229 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 NR1H2P55055 460 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 ISL1P61371 349 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 CD47Q08722 323 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 DCTN2Q13561 401 aaKnown RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 KEAP1Q14145 624 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 P2RY6Q15077 328 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 SNAPC1Q16533 368 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 SLC25A30Q5SVS4 291 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 C6orf52Q5T4I8 152 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF691Q5VV52 312 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 PLBD1Q6P4A8 553 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 HDDC2Q7Z4H3 204 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 CPOQ8IVL8 374 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 ENTHD1Q8IYW4 607 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 UBE2J2Q8N2K1 259 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 GPR137CQ8N3F9 429 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 OR51L1Q8NGJ5 315 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 OR1K1Q8NGR3 316 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 RHOXF1Q8NHV9 184 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 TMEM163Q8TC26 289 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 CA5BP1Q8WTZ4 195 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 FBLIM1Q8WUP2 373 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 NSMAFQ92636 917 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 RNASE6Q93091 150 aaKnown RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 FOXN4Q96NZ1 517 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 IL4I1Q96RQ9 567 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 RBM24Q9BX46 236 aaKnown RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 NDEL1Q9GZM8 345 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 RACGAP1Q9H0H5 632 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 SRA1Q9HD15 236 aaKnown RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 TMEM38BQ9NVV0 291 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 MRPL22Q9NWU5 206 aaKnown RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 ELOVL5Q9NYP7 299 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 TAS2R16Q9NYV7 291 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 UPB1Q9UBR1 384 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 BLOC1S6Q9UL45 172 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 COA3Q9Y2R0 106 aaPredicted RBP9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 PCDHGB5Q9Y5G0 923 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 FKBP7Q9Y680 259 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 CSMD2Q7Z408 3487 aa9.35□□□□□ -0.91
NPIPB3-210ENST00000542817 RIIAD1A6NNX1 92 aa9.34□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF587BE7ETH6 402 aa9.34□□□□□ -0.91
NPIPB3-210ENST00000542817 H0YAE9 185 aa9.34□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF701M0R085 212 aaPredicted RBP9.34□□□□□ -0.91
NPIPB3-210ENST00000542817 CLPTM1O96005 669 aa9.34□□□□□ -0.91
NPIPB3-210ENST00000542817 SMIM18P0DKX4 95 aa9.34□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF3P17036 446 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms