RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	OR5B3	Q8NH48	314 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	OR6X1	Q8NH79	312 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	LYPD6B	Q8NI32	183 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	CAPSL	Q8WWF8	208 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	RDH5	Q92781	318 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	OR2M2	Q96R28	347 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	P2RX4	Q99571	388 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	TEKT3	Q9BXF9	490 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	GABARAPL3	Q9BY60	117 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	MRPS30	Q9NP92	439 aa	Known RBP	2.7	□□□□□ -1.98
RDX-208	ENST00000530085	CCNB1IP1	Q9NPC3	277 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	CLN8	Q9UBY8	286 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	TRAPPC4	Q9Y296	219 aa		2.7	□□□□□ -1.98
RDX-208	ENST00000530085	F11R	Q9Y624	299 aa	Known RBP	2.7	□□□□□ -1.98
RDX-208	ENST00000530085	KCNE1B	A0A087WTH5	132 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	HIDE1	A8MVS5	230 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085		H0YC42	278 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085		L7N2F9	121 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	AKR7A2	O43488	359 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	CLDN11	O75508	207 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	CCNB2	O95067	398 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	ACSM4	P0C7M7	580 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	SMIM10L1	P0DMW3	83 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	RALB	P11234	206 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	RCC1	P18754	421 aa	Predicted RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	CCNE1	P24864	410 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	AK4	P27144	223 aa	Predicted RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	NUTF2	P61970	127 aa	Known RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	SLC25A11	Q02978	314 aa	Known RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	UNC119	Q13432	240 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	SF3A2	Q15428	464 aa	Known RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	PGGHG	Q32M88	737 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	LCE3C	Q5T5A8	94 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	CCNJ	Q5T5M9	372 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	TMEM179	Q6ZVK1	233 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	CMC1	Q7Z7K0	106 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	LINC01555	Q8NAE3	123 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	DTX3L	Q8TDB6	740 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	ELSPBP1	Q96BH3	223 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	SMIM10	Q96HG1	83 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	SERPINB12	Q96P63	405 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	TSSK3	Q96PN8	268 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	XPO6	Q96QU8	1125 aa	Known RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	ANKRD60	Q9BZ19	345 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	DNTTIP1	Q9H147	329 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	LYRM4	Q9HD34	91 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	RPRD1B	Q9NQG5	326 aa	Known RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	MRPL22	Q9NWU5	206 aa	Known RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	MTCH1	Q9NZJ7	389 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	CCDC59	Q9P031	241 aa	Known RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	NUFIP1	Q9UHK0	495 aa	Known RBP	2.69	□□□□□ -1.98
RDX-208	ENST00000530085	ZNF225	Q9UK10	706 aa		2.69	□□□□□ -1.98
RDX-208	ENST00000530085	CENPJ	Q9HC77	1338 aa	Predicted RBP	2.68	□□□□□ -1.98
RDX-208	ENST00000530085	LTBP1	Q14766	1721 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085		A0A1B0GUA9	196 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085		A0A1B0GVY2	172 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	PRSS37	A4D1T9	235 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	PANO1	I0J062	215 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	ZNF861P	O60384	105 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	DPM1	O60762	260 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	SRP72	O76094	671 aa	Known RBP	2.68	□□□□□ -1.98
RDX-208	ENST00000530085	FGFR1OP	O95684	399 aa	Known RBP	2.68	□□□□□ -1.98
RDX-208	ENST00000530085	AIFM1	O95831	613 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	CALM1	P0DP23	149 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	CALM2	P0DP24	149 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	CALM3	P0DP25	149 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	ZNF17	P17021	662 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	CNR1	P21554	472 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	HRH1	P35367	487 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	GPX4	P36969	197 aa	Predicted RBP	2.68	□□□□□ -1.98
RDX-208	ENST00000530085	CSNK1D	P48730	415 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	LHX2	P50458	406 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	CRISP1	P54107	249 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	CLDN8	P56748	225 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	EIF3E	P60228	445 aa	Known RBP	2.68	□□□□□ -1.98
RDX-208	ENST00000530085	STXBP1	P61764	594 aa	Known RBP	2.68	□□□□□ -1.98
RDX-208	ENST00000530085	IRF8	Q02556	426 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	PIP5KL1	Q5T9C9	394 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	ANKRD22	Q5VYY1	191 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	SPECC1L	Q69YQ0	1117 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	STUM	Q69YW2	141 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	MREG	Q8N565	214 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	FAM184A	Q8NB25	1140 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	OR9G4	Q8NGQ1	327 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	GLYATL2	Q8WU03	294 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	RNF138	Q8WVD3	245 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	DNAJC19	Q96DA6	116 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	ZIM3	Q96PE6	472 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	OR5B12	Q96R08	314 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	MRPL37	Q9BZE1	423 aa	Known RBP	2.68	□□□□□ -1.98
RDX-208	ENST00000530085	SLCO1B3	Q9NPD5	702 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	ZNF226	Q9NYT6	803 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	DEC1	Q9P2X7	70 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	PCYOX1	Q9UHG3	505 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	CACNG2	Q9Y698	323 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	MAPK8IP3	Q9UPT6	1336 aa		2.68	□□□□□ -1.98
RDX-208	ENST00000530085	ARAP1	Q96P48	1450 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085		H0YHG0	523 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	KMO	O15229	486 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	CD160	O95971	181 aa		2.67	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms