RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 RERGLQ9H628 205 aa11.41□□□□□ -0.58
PABPC1-205ENST00000518196 SRA1Q9HD15 236 aaKnown RBP11.41□□□□□ -0.58
PABPC1-205ENST00000518196 RPRD1BQ9NQG5 326 aaKnown RBP11.41□□□□□ -0.58
PABPC1-205ENST00000518196 FAM118AQ9NWS6 357 aa11.41□□□□□ -0.58
PABPC1-205ENST00000518196 GMPPBQ9Y5P6 360 aa11.41□□□□□ -0.58
PABPC1-205ENST00000518196 KLF2Q9Y5W3 355 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-205ENST00000518196 FKBP7Q9Y680 259 aa11.41□□□□□ -0.58
PABPC1-205ENST00000518196 LOC100130705A0A1B0GUX0 176 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 OR6C68A6NDL8 312 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 PRR23D1E9PI22 279 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-205ENST00000518196 H0YJX3 145 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 RAD51DO75771 328 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 RNF224P0DH78 156 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 PRR23D2P0DMB1 279 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-205ENST00000518196 PPP3CBP16298 524 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 ZNF16P17020 682 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-205ENST00000518196 HOXC12P31275 282 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 GGT2P36268 569 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 CENPAP49450 140 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 SLC25A1P53007 311 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 SORDQ00796 357 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 CRMP1Q14194 572 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 TSC22D1Q15714 1073 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 TTC23Q5W5X9 447 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 FBXW10Q5XX13 1052 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 ANKRD16Q6P6B7 361 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 ZNF813Q6ZN06 617 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 OR1K1Q8NGR3 316 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 OR2T4Q8NH00 348 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 MBOAT4Q96T53 435 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 DDOQ99489 341 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 FN3KQ9H479 309 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 SEC61A2Q9H9S3 476 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 IMPAD1Q9NX62 359 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 H2AFY2Q9P0M6 372 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-205ENST00000518196 B9D1Q9UPM9 204 aa11.4□□□□□ -0.58
PABPC1-205ENST00000518196 RELNP78509 3460 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 IGKV1D-43A0A0B4J1Z2 117 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 A0A1W2PPL8 197 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 PRSS44E7EML9 344 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 DLGAP1O14490 977 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 SLC16A6O15403 523 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 TLX2O43763 284 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 FARS2O95363 451 aaKnown RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 CTLA4P16410 223 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 NPR2P20594 1047 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 LAP3P28838 519 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 VHLP40337 213 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 MRPS34P82930 218 aaKnown RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 ETFDHQ16134 617 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 GABRA6Q16445 453 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 SGCAQ16586 387 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 KLHL24Q6TFL4 600 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 ZNF627Q7L945 461 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 CXXC5Q7LFL8 322 aaKnown RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 ZBTB46Q86UZ6 589 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 P2RY8Q86VZ1 359 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 CPOQ8IVL8 374 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 CCDC36Q8IYA8 594 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 OR6V1Q8N148 313 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 C17orf78Q8N4C9 275 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 TCEANCQ8N8B7 351 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 FAM81AQ8TBF8 368 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 TRUB1Q8WWH5 349 aaKnown RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 CYGBQ8WWM9 190 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 BCL2L2Q92843 193 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 BOD1Q96IK1 185 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 MUS81Q96NY9 551 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 TSSK2Q96PF2 358 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 ACTR6Q9GZN1 396 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 RACGAP1Q9H0H5 632 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 KCNN2Q9H2S1 579 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 TMEM38BQ9NVV0 291 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 NDRG3Q9UGV2 375 aa11.39□□□□□ -0.59
PABPC1-205ENST00000518196 NDRG4Q9ULP0 352 aaKnown RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 COA3Q9Y2R0 106 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 SPTBN1Q01082 2364 aaKnown RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 UBR5O95071 2799 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-205ENST00000518196 FAM183AA6NL82 134 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 E9PQ18 207 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 H0YAE9 185 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 OR8G3PP0DMU2 310 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 BLVRAP53004 296 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 UBE2NP61088 152 aaKnown RBP11.38□□□□□ -0.59
PABPC1-205ENST00000518196 GLO1Q04760 184 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 KEAP1Q14145 624 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 SNCBQ16143 134 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 TBRG1Q3YBR2 411 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 NRN1LQ496H8 165 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 TIMM23BQ5SRD1 257 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 C1QTNF12Q5T7M4 302 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 PLBD1Q6P4A8 553 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 SSX8Q7RTT4 187 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 GLB1L2Q8IW92 636 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 SLC22A24Q8N4F4 322 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 PROKR2Q8NFJ6 384 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 OR8J1Q8NGP2 316 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 OR9Q1Q8NGQ5 310 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 TMEM163Q8TC26 289 aa11.38□□□□□ -0.59
PABPC1-205ENST00000518196 HSD17B8Q92506 261 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms