RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 PGGHGQ32M88 737 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TBRG1Q3YBR2 411 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 HIKESHIQ53FT3 197 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 RNASE12Q5GAN4 147 aaKnown RBP3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 SPANXN4Q5MJ08 99 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 MRPL2Q5T653 305 aaKnown RBP3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 C1orf140Q5VVS0 124 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TYW3Q6IPR3 259 aaKnown RBP3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TMEM53Q6P2H8 277 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ARL9Q6T311 187 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 HDDC2Q7Z4H3 204 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 CLEC4FQ8N1N0 589 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 RFLNBQ8N5W9 214 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 C3orf56Q8N813 242 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF781Q8N8C0 355 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 OR9K2Q8NGE7 335 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 OR52E4Q8NGH9 312 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 PSMA8Q8TAA3 256 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 BBS10Q8TAM1 723 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 C10orf105Q8TEF2 133 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ABHD5Q8WTS1 349 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 DNAJA4Q8WW22 397 aaPredicted RBP3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 LZICQ8WZA0 190 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 HTRA1Q92743 480 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TMEM45BQ96B21 275 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TESCQ96BS2 214 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZMYND19Q96E35 227 aaPredicted RBP3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 DAZAP1Q96EP5 407 aaKnown RBP3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 SLC47A1Q96FL8 570 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 PKNOX2Q96KN3 472 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 FCRL1Q96LA6 429 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 MUS81Q96NY9 551 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ALKBH3Q96Q83 286 aaPredicted RBP3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 CCDC106Q9BWC9 280 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 OR11A1Q9GZK7 315 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF350Q9GZX5 532 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TUBB1Q9H4B7 451 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 RABEP2Q9H5N1 569 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 COQ10BQ9H8M1 238 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 EVA1AQ9H8M9 152 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 CDH20Q9HBT6 801 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TRIM36Q9NQ86 728 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 CA10Q9NS85 328 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 SIRT3Q9NTG7 399 aaPredicted RBP3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 THAP1Q9NVV9 213 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TMEM160Q9NX00 188 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ASIC5Q9NY37 505 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 SLC17A7Q9P2U7 560 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 MALT1Q9UDY8 824 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 GIMAP2Q9UG22 337 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZDHHC2Q9UIJ5 367 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ANGPT4Q9Y264 503 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 CCL27Q9Y4X3 112 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 SLC25A15Q9Y619 301 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 KCNE3Q9Y6H6 103 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 DSCAMO60469 2012 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 ARID1AO14497 2285 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 EXPH5Q8NEV8 1989 aa3.27□□□□□ -1.89
HMGN1P11-201ENST00000508668 TRAV36DV7A0A075B6V5 113 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 TMEM72A0PK05 275 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 ISPDA4D126 451 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 GMNCA6NCL1 334 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 LIPT2A6NK58 231 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 AQP12BA6NM10 295 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 SHISA9B4DS77 424 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 B4DSR2 109 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 M0R233 179 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 M0R3G1 203 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 M0R3H8 397 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 FAAHO00519 579 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 ANGPT2O15123 496 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 PPIHO43447 177 aaKnown RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 RNF13O43567 381 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 GPRIN2O60269 458 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF432O94892 652 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 IFNA14P01570 189 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 LCKP06239 509 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 ZNF23P17027 643 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 BGNP21810 368 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 CCNOP22674 350 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 GCH1P30793 250 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 APLNRP35414 380 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 MAP3K8P41279 467 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 NR4A2P43354 598 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 GPR6P46095 362 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 RPS5P46782 204 aaKnown RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 CSNK1A1P48729 337 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 PPOXP50336 477 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 POLR2JP52435 117 aaKnown RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 ARHGDIAP52565 204 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 RGS8P57771 180 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 NANOS3P60323 173 aaKnown RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 IRX1P78414 480 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 POU3F1Q03052 451 aaPredicted RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 HSF2Q03933 536 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 SLC3A1Q07837 685 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 EPS8Q12929 822 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 FADDQ13158 208 aa3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 SNTB2Q13425 540 aaKnown RBP3.26□□□□□ -1.89
HMGN1P11-201ENST00000508668 FHL3Q13643 280 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms