RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 LOXP28300 417 aaPredicted RBP9.7□□□□□ -0.86
APTX-230ENST00000494649 LAP3P28838 519 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.7□□□□□ -0.86
APTX-230ENST00000494649 THEM4Q5T1C6 240 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 NCMAPQ5T1S8 102 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 FAM205BPQ63HN1 556 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 GPR139Q6DWJ6 353 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 SLC25A47Q6Q0C1 308 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 SLC22A25Q6T423 547 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 SLC16A14Q7RTX9 510 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 P2RY8Q86VZ1 359 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 OR2T33Q8NG76 320 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 STMN2Q93045 179 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 CENPNQ96H22 339 aaPredicted RBP9.7□□□□□ -0.86
APTX-230ENST00000494649 ALG12Q9BV10 488 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 ESRP2Q9H6T0 727 aaKnown RBP9.7□□□□□ -0.86
APTX-230ENST00000494649 RNF121Q9H920 327 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 PAPOLBQ9NRJ5 636 aaKnown RBP9.7□□□□□ -0.86
APTX-230ENST00000494649 STX18Q9P2W9 335 aaKnown RBP9.7□□□□□ -0.86
APTX-230ENST00000494649 MOKQ9UQ07 419 aa9.7□□□□□ -0.86
APTX-230ENST00000494649 FAM221AA4D161 298 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 ARRDC5A6NEK1 342 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 WNT11O96014 354 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 OR8G3PP0DMU2 310 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 CLUP10909 449 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 ANXA8P13928 327 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 CD40P25942 277 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 EPHA2P29317 976 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 RAB1AP62820 205 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 GSG1Q2KHT4 349 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 C10orf128Q5T292 105 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 ACSM5Q6NUN0 579 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 LYPD4Q6UWN0 246 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 ZNF704Q6ZNC4 412 aaPredicted RBP9.69□□□□□ -0.86
APTX-230ENST00000494649 OR6V1Q8N148 313 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 ZNRF4Q8WWF5 429 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 NABP1Q96AH0 204 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 MED20Q9H944 212 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 NGBQ9NPG2 151 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 KRT84Q9NSB2 600 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 POU2F3Q9UKI9 436 aa9.69□□□□□ -0.86
APTX-230ENST00000494649 ATP6V1G2-DDX39BF2Z307 99 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 ARPC3O15145 178 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 FARS2O95363 451 aaKnown RBP9.68□□□□□ -0.86
APTX-230ENST00000494649 TXNDC12O95881 172 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 CD3EP07766 207 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 CECR9P0C854 216 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 OSMP13725 252 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 PYCR1P32322 319 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 POLR2IP36954 125 aaKnown RBP9.68□□□□□ -0.86
APTX-230ENST00000494649 CRMP1Q14194 572 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 GINS1Q14691 196 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 RAB39AQ14964 217 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 RPL13AP3Q6NVV1 102 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 ZFP1Q6P2D0 407 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 FAHD1Q6P587 224 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 TMEM108Q6UXF1 575 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 HIPK1Q86Z02 1210 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 NPEPL1Q8NDH3 523 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 AKAP1Q92667 903 aaKnown RBP eCLIP9.68□□□□□ -0.86
APTX-230ENST00000494649 LURAP1Q96LR2 239 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 OR51B6Q9H340 312 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 PLEKHA6Q9Y2H5 1048 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 VPS13CQ709C8 3753 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 ARPC4-TTLL3A0A0A6YYG9 625 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 RENP00797 406 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 HLA-DQA2P01906 255 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 RPS27P42677 84 aaKnown RBP9.68□□□□□ -0.86
APTX-230ENST00000494649 COX10Q12887 443 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 GK3PQ14409 553 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 LRRC36Q1X8D7 754 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 PGGHGQ32M88 737 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 ZNF362Q5T0B9 420 aaPredicted RBP9.68□□□□□ -0.86
APTX-230ENST00000494649 VHLLQ6RSH7 139 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 CD300LDQ6UXZ3 194 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 ADCK1Q86TW2 530 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 LNX2Q8N448 690 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 SLC37A3Q8NCC5 494 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 LILRB1Q8NHL6 650 aaPredicted RBP9.68□□□□□ -0.86
APTX-230ENST00000494649 AKR7LQ8NHP1 331 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 FBXO17Q96EF6 278 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 SLC38A2Q96QD8 506 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 USB1Q9BQ65 265 aaKnown RBP9.68□□□□□ -0.86
APTX-230ENST00000494649 HCAR1Q9BXC0 346 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 PLEKHF2Q9H8W4 249 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 VSX1Q9NZR4 365 aaPredicted RBP9.68□□□□□ -0.86
APTX-230ENST00000494649 RNF115Q9Y4L5 304 aa9.68□□□□□ -0.86
APTX-230ENST00000494649 CENPBD1B2RD01 187 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 EI24O14681 340 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 RAB36O95755 333 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 APEHP13798 732 aaKnown RBP9.67□□□□□ -0.86
APTX-230ENST00000494649 ZNF32P17041 273 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 CCNOP22674 350 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 IGFBP5P24593 272 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 CALCRP30988 508 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 GUCA1AP43080 201 aaPredicted RBP9.67□□□□□ -0.86
APTX-230ENST00000494649 NR1H2P55055 460 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 SLC27A4Q6P1M0 643 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 B3GLCTQ6Y288 498 aa9.67□□□□□ -0.86
APTX-230ENST00000494649 NRBF2Q96F24 287 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms