RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 PDLIM4P50479 330 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 DAP3P51398 398 aaKnown RBP10.82□□□□□ -0.68
HSPG2-212ENST00000493940 ERVK-25P63136 954 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 HNRNPA0Q13151 305 aaKnown RBP10.82□□□□□ -0.68
HSPG2-212ENST00000493940 GGTLC2Q14390 218 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 CARTPTQ16568 116 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 SGCAQ16586 387 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 PABPC1L2AQ5JQF8 200 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 ELFN2Q5R3F8 820 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 UGT2A3Q6UWM9 527 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 THSD4Q6ZMP0 1018 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 TMPRSS11FQ6ZWK6 438 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 MBOAT2Q6ZWT7 520 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 SLC16A14Q7RTX9 510 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 CPLX4Q7Z7G2 160 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 SLC30A7Q8NEW0 376 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 AKR7LQ8NHP1 331 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 ACOT11Q8WXI4 607 aaPredicted RBP10.82□□□□□ -0.68
HSPG2-212ENST00000493940 LZICQ8WZA0 190 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 CMTM5Q96DZ9 223 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 FAM46AQ96IP4 442 aaKnown RBP10.82□□□□□ -0.68
HSPG2-212ENST00000493940 Q96M85 177 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 BPESC1Q9GZL8 116 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 RNF121Q9H920 327 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 MOV10Q9HCE1 1003 aaKnown RBP10.82□□□□□ -0.68
HSPG2-212ENST00000493940 ADA2Q9NZK5 511 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 V9GYQ6 96 aa10.82□□□□□ -0.68
HSPG2-212ENST00000493940 NPIPB13A6NJU9 1138 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 CENPBD1B2RD01 187 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 NPIPB4C9JG80 1138 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 LILRA1O75019 489 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 NCR1O76036 304 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 HPXP02790 462 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 SAGP10523 405 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-212ENST00000493940 BMP4P12644 408 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 DAOP14920 347 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 USF1P22415 310 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-212ENST00000493940 RBMXP38159 391 aaKnown RBP10.81□□□□□ -0.68
HSPG2-212ENST00000493940 WNT5AP41221 380 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 OMPP47874 163 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 MRPS34P82930 218 aaKnown RBP10.81□□□□□ -0.68
HSPG2-212ENST00000493940 PSG4Q00888 419 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 CD47Q08722 323 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 ENDOGQ14249 297 aaKnown RBP10.81□□□□□ -0.68
HSPG2-212ENST00000493940 TRIP10Q15642 601 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 ZNF730Q6ZMV8 503 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 FOXL2NBQ6ZUU3 175 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 FAM122BQ7Z309 247 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 OAFQ86UD1 273 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 HIPK1Q86Z02 1210 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 RNF113BQ8IZP6 322 aaKnown RBP10.81□□□□□ -0.68
HSPG2-212ENST00000493940 MSI2Q96DH6 328 aaKnown RBP10.81□□□□□ -0.68
HSPG2-212ENST00000493940 DHRS1Q96LJ7 313 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 WNT5BQ9H1J7 359 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 DENND2DQ9H6A0 471 aaPredicted RBP10.81□□□□□ -0.68
HSPG2-212ENST00000493940 SIAEQ9HAT2 523 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 IL20RAQ9UHF4 553 aa10.81□□□□□ -0.68
HSPG2-212ENST00000493940 LOC390937A0A1W2PQ73 354 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 WNT9BO14905 357 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 SYNGR3O43761 229 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 TLX2O43763 284 aaPredicted RBP10.8□□□□□ -0.68
HSPG2-212ENST00000493940 NAT2P11245 290 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 ZNF16P17020 682 aaPredicted RBP10.8□□□□□ -0.68
HSPG2-212ENST00000493940 LAP3P28838 519 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 EVX1P49640 407 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 ZNF84P51523 738 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 UCP2P55851 309 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 RIN1Q13671 783 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 ZBED5Q49AG3 693 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 MESTQ5EB52 335 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 ZNF101Q8IZC7 436 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 OR52J3Q8NH60 311 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 YIPF5Q969M3 257 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 RASD2Q96D21 266 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 POM121L2Q96KW2 1035 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 CDRT15Q96T59 188 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 RAB1BQ9H0U4 201 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 GORASP2Q9H8Y8 452 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 SPAG4Q9NPE6 437 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 REV1Q9UBZ9 1251 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 DUSP13Q9UII6 198 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 SIGLEC7Q9Y286 467 aa10.8□□□□□ -0.68
HSPG2-212ENST00000493940 A0A1W2PRQ8 180 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 SLC22A23A1A5C7 686 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 A8MV72 311 aaPredicted RBP10.79□□□□□ -0.68
HSPG2-212ENST00000493940 MPZL1O95297 269 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 FARS2O95363 451 aaKnown RBP10.79□□□□□ -0.68
HSPG2-212ENST00000493940 GPANK1O95872 356 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 NGFP01138 241 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 TP53P04637 393 aaPredicted RBP10.79□□□□□ -0.68
HSPG2-212ENST00000493940 H1F0P07305 194 aaKnown RBP10.79□□□□□ -0.68
HSPG2-212ENST00000493940 HSD17B1P14061 328 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 ZNF250P15622 560 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 GIFP27352 417 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 MAGEB1P43366 347 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 SLC9A3P48764 834 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 DGCR6Q14129 220 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 NRN1LQ496H8 165 aa10.79□□□□□ -0.68
HSPG2-212ENST00000493940 SPRNQ5BIV9 151 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms