RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SLC36A3Q495N2 470 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 CCDC184Q52MB2 194 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 TTC23Q5W5X9 447 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 CNSTQ6PJW8 725 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 CEMP1Q6PRD7 247 aaPredicted RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 ASCL5Q7RTU5 278 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 LHFPL3Q86UP9 236 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 ECHDC2Q86YB7 292 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 ANKFN1Q8N957 763 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 TRPV1Q8NER1 839 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 OR4K5Q8NGD3 323 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 OR2G2Q8NGZ5 317 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 OR8U1Q8NH10 309 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 STMN2Q93045 179 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 SLC25A46Q96AG3 418 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 FAM3DQ96BQ1 224 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 FLYWCH2Q96CP2 140 aaKnown RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 SEH1LQ96EE3 360 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 NEURL3Q96EH8 262 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 MED8Q96G25 268 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 SENP8Q96LD8 212 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 OR8B4Q96RC9 309 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 SECISBP2Q96T21 854 aaKnown RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 TM2D3Q9BRN9 247 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 SAV1Q9H4B6 383 aaPredicted RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 SGK2Q9HBY8 427 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 FBXO6Q9NRD1 293 aaPredicted RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 TMOD2Q9NZR1 351 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 ACTR3BQ9P1U1 418 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 MEMO1Q9Y316 297 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 HYOU1Q9Y4L1 999 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 AHDC1Q5TGY3 1603 aaPredicted RBP0.67□□□□□ -2.3
CCDC93-209ENST00000488908 TNS2Q63HR2 1409 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 IGHV1OR15-9A0A0B4J2B8 117 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 J3QRE1 110 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 SOX15O60248 233 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 TBX19O60806 448 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 EIF3GO75821 320 aaKnown RBP eCLIP0.67□□□□□ -2.3
CCDC93-209ENST00000488908 CLDN9O95484 217 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 IGLV6-57P01721 117 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 IGHV2-5P01817 119 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 KRT8P05787 483 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 GNAO1P09471 354 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 CT62P0C5K7 136 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF688P0C7X2 276 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF735P0CB33 412 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 CCNB1P14635 433 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 RAB3BP20337 219 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 ATP6V1C1P21283 382 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 MDH1P40925 334 aaKnown RBP0.67□□□□□ -2.3
CCDC93-209ENST00000488908 RGS4P49798 205 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 RORCP51449 518 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 DUSP3P51452 185 aaPredicted RBP0.67□□□□□ -2.3
CCDC93-209ENST00000488908 PRKCDQ05655 676 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 CLINT1Q14677 625 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 SFT2D3Q587I9 215 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 RIPPLY2Q5TAB7 128 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 SAXO2Q658L1 398 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 OR2A2Q6IF42 318 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 ARL9Q6T311 187 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 ISLR2Q6UXK2 745 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 MFSD9Q8NBP5 474 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF680Q8NEM1 530 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 FAM110BQ8TC76 370 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 MAGEE2Q8TD90 523 aaPredicted RBP0.67□□□□□ -2.3
CCDC93-209ENST00000488908 SHC3Q92529 594 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 TMEM54Q969K7 222 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 NTAN1Q96AB6 310 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 PIK3IP1Q96FE7 263 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 RBM14Q96PK6 669 aaKnown RBP0.67□□□□□ -2.3
CCDC93-209ENST00000488908 SH3GL1Q99961 368 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 TPPP3Q9BW30 176 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 FAIM2Q9BWQ8 316 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 PARD6BQ9BYG5 372 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 AZI2Q9H6S1 392 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 RPF2Q9H7B2 306 aaKnown RBP0.67□□□□□ -2.3
CCDC93-209ENST00000488908 NIPAL2Q9H841 368 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 NEK6Q9HC98 313 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF639Q9UID6 485 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 CDH9Q9ULB4 789 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 ODF2LQ9ULJ1 636 aa0.67□□□□□ -2.3
CCDC93-209ENST00000488908 CDHR2Q9BYE9 1310 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 A0A1B0GWJ7 208 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 C5orf63A6NC05 138 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 CCL21O00585 134 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 PRRG1O14668 218 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 SOCS1O15524 211 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 FCMRO60667 390 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 OR7A10O76100 309 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 UTS2O95399 124 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 DIRAS3O95661 229 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF806P0C7X5 589 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 DBTP11182 482 aaKnown RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 NCF1P14598 390 aaPredicted RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 WARSP23381 471 aaKnown RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 SSTR5P35346 364 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 ATP5C1P36542 298 aaKnown RBP0.66□□□□□ -2.3
CCDC93-209ENST00000488908 VHLP40337 213 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 EPS15P42566 896 aa0.66□□□□□ -2.3
CCDC93-209ENST00000488908 GDI2P50395 445 aaKnown RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms