RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 EPGNQ6UW88 154 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 HDDC2Q7Z4H3 204 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 C1orf174Q8IYL3 243 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 ZNF101Q8IZC7 436 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 LRRC17Q8N6Y2 441 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 ICA1LQ8NDH6 482 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 OR6T1Q8NGN1 323 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 IPCEF1Q8WWN9 437 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-209ENST00000463631 CCL17Q92583 94 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 TRIM44Q96DX7 344 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-209ENST00000463631 MARS2Q96GW9 593 aaKnown RBP14.64□□□□□ -0.07
HMGN1-209ENST00000463631 MPP4Q96JB8 637 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 CYSLTR2Q9NS75 346 aa14.64□□□□□ -0.07
HMGN1-209ENST00000463631 POLR3KQ9Y2Y1 108 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-209ENST00000463631 DNAJC9-AS1A6NH13 148 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 ZSCAN5BA6NJL1 495 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 H3BSA7 217 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 FOXH1O75593 365 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 CD55P08174 381 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 STOMP27105 288 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 WNT5AP41221 380 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 ATP4BP51164 291 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 CLRN1P58418 232 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 HSF2Q03933 536 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 DUSP7Q16829 419 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 ZNF718Q3SXZ3 478 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 PABPC1L2AQ5JQF8 200 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 TMEM255AQ5JRV8 349 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 ENTPD8Q5MY95 495 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 TTC33Q6PID6 262 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-209ENST00000463631 UNQ6126/PRO20091Q6UXV3 157 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 NANOGNBQ7Z5D8 188 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 SIGLECL1Q8N7X8 197 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 SMYD1Q8NB12 490 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 SYT14Q8NB59 555 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 ST7LQ8TDW4 575 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 ADAMTS16Q8TE57 1224 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 POM121L2Q96KW2 1035 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 ZNF347Q96SE7 839 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 EGLN1Q9GZT9 426 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 PCDHAC1Q9H158 963 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 SIAEQ9HAT2 523 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 SMURF2Q9HAU4 748 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 LEF1Q9UJU2 399 aaPredicted RBP14.63□□□□□ -0.07
HMGN1-209ENST00000463631 PURGQ9UJV8 347 aaKnown RBP14.63□□□□□ -0.07
HMGN1-209ENST00000463631 USH1CQ9Y6N9 552 aa14.63□□□□□ -0.07
HMGN1-209ENST00000463631 ISPDA4D126 451 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 TRAPPC13A5PLN9 417 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 CPSF4LA6NMK7 179 aaKnown RBP14.62□□□□□ -0.07
HMGN1-209ENST00000463631 EVPLLA8MZ36 301 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 GCH1P30793 250 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 LIPAP38571 399 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 MPV17P39210 176 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 ZMAT1Q5H9K5 638 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 TREML4Q6UXN2 200 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 TSPYL5Q86VY4 417 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-209ENST00000463631 PTOV1Q86YD1 416 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 C11orf65Q8NCR3 313 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 GPR32P1Q8NGA4 272 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 ASB10Q8WXI3 467 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 NMD3Q96D46 503 aaKnown RBP14.62□□□□□ -0.07
HMGN1-209ENST00000463631 C1orf147Q96MC9 270 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-209ENST00000463631 DIRC2Q96SL1 478 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 GPA33Q99795 319 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 CPPED1Q9BRF8 314 aaPredicted RBP14.62□□□□□ -0.07
HMGN1-209ENST00000463631 PLEK2Q9NYT0 353 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 NUP50Q9UKX7 468 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 ZDHHC8Q9ULC8 765 aa14.62□□□□□ -0.07
HMGN1-209ENST00000463631 A0A1W2PRG6 482 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 CLDN34H7C241 214 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 KPNA4O00629 521 aaPredicted RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 POLR3GO15318 223 aaPredicted RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 SPRY3O43610 288 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 ERLIN1O75477 346 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 TGDSO95455 350 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 IGHV2-70P01814 119 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 IGHMP01871 453 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 HIST1H2ABP04908 130 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 RNASE1P07998 156 aaKnown RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 ZFP36P26651 326 aaKnown RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 DAP3P51398 398 aaKnown RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 RPL18Q07020 188 aaKnown RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 ARMCX4Q5H9R4 360 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 THEM4Q5T1C6 240 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 RFPL4BQ6ZWI9 263 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 HIST3H2AQ7L7L0 130 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 LRRC18Q8N456 261 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 KLF14Q8TD94 323 aaPredicted RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 HIST1H2ACQ93077 130 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 NABP1Q96AH0 204 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 MEPEQ9NQ76 525 aaPredicted RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 UBAP1Q9NZ09 502 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 CCDC167Q9P0B6 97 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 STX18Q9P2W9 335 aaKnown RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 ZNF69Q9UC07 566 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.61□□□□□ -0.07
HMGN1-209ENST00000463631 SLC7A7Q9UM01 511 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 UGT2A1Q9Y4X1 527 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 NPTNQ9Y639 398 aa14.61□□□□□ -0.07
HMGN1-209ENST00000463631 LOC100509620A0A075B734 347 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms