RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 MAP2K6P52564 334 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 BCL2A1Q16548 175 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ANGPTL5Q86XS5 388 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 CPT1CQ8TCG5 803 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ZNF649Q9BS31 505 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ANXA7P20073 488 aaKnown RBP13.48□□□□□ -0.25
PTPRU-205ENST00000460170 DCAF12Q5T6F0 453 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ZNF707Q96C28 371 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-205ENST00000460170 PAPOLGQ9BWT3 736 aaKnown RBP13.48□□□□□ -0.25
PTPRU-205ENST00000460170 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 PRAMEF27A3QJZ7 478 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 TRAPPC2LH3BP13 241 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 TK1P04183 234 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 CHRM2P08172 466 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 S100PP25815 95 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ARG2P78540 354 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 HSF1Q00613 529 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ESCO2Q56NI9 601 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 C9orf135Q5VTT2 229 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 PRAMEF9Q5VWM5 478 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 STT3BQ8TCJ2 826 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 NEURL2Q9BR09 285 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 SPTY2D1-AS1A0A0U1RR47 76 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 LOC107986453A0A1B0GWG9 222 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 FITM1A5D6W6 292 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 SIX6O95475 246 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 FGF9P31371 208 aaPredicted RBP13.47□□□□□ -0.25
PTPRU-205ENST00000460170 RPS27P42677 84 aaKnown RBP13.47□□□□□ -0.25
PTPRU-205ENST00000460170 GFERP55789 205 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 ECH1Q13011 328 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 C9orf50Q5SZB4 431 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 FAM27D1Q5T7N8 215 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 CMTM4Q8IZR5 234 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 GJC3Q8NFK1 279 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 OR5L1Q8NGL2 311 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 COX14Q96I36 57 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 OR2A14Q96R47 310 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 DDOQ99489 341 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 ATF6BQ99941 703 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 PIGQQ9BRB3 760 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 OR11A1Q9GZK7 315 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 OR51B6Q9H340 312 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 GAREM1Q9H706 876 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 CHST11Q9NPF2 352 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 HRO43593 1189 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 ZNF254O75437 659 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 LPLP06858 475 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 GLIPR1L1Q6UWM5 242 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 SLC51BQ86UW2 128 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 HSD17B8Q92506 261 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 PHF7Q9BWX1 381 aaPredicted RBP13.47□□□□□ -0.25
PTPRU-205ENST00000460170 KCNJ16Q9NPI9 418 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 SLC2A1P11166 492 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 TGM1P22735 817 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 CLDN20P56880 219 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 ZNF684Q5T5D7 378 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 TMPRSS11FQ6ZWK6 438 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 RDH10Q8IZV5 341 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 ZG16BQ96DA0 208 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 TAS2R4Q9NYW5 299 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 TRAPPC4Q9Y296 219 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 ANKRD33BA6NCL7 494 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 E9PI62 339 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 NPIPB8E9PQR5 432 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 FADS1O60427 444 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 EGR3Q06889 387 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 APH1BQ8WW43 257 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 RADILQ96JH8 1075 aa13.47□□□□□ -0.25
PTPRU-205ENST00000460170 A0A0B4J203 849 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 TMEM221A6NGB7 291 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 PRICKLE3O43900 615 aaPredicted RBP13.46□□□□□ -0.25
PTPRU-205ENST00000460170 STK17BO94768 372 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 EPHA4P54764 986 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 DYRK1AQ13627 763 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 DOC2BQ14184 412 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 PRTGQ2VWP7 1150 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 IL1F10Q8WWZ1 152 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 HRH4Q9H3N8 390 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 SCPEP1Q9HB40 452 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 TRIP12Q14669 1992 aaPredicted RBP13.46□□□□□ -0.25
PTPRU-205ENST00000460170 OR6C76A6NM76 312 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 KRBOX1C9JBD0 128 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 DRD3P35462 400 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.25
PTPRU-205ENST00000460170 TIGD3Q6B0B8 471 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 ETFBKMTQ8IXQ9 262 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 MFSD4AQ8N468 514 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 MORN4Q8NDC4 146 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 ENPP1P22413 925 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 CRYBB2P43320 205 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 CARD18P57730 90 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 SSX1Q16384 188 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 TMEM81Q6P7N7 255 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 CD300LDQ6UXZ3 194 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 OR4N2Q8NGD1 307 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 CCDC74AQ96AQ1 378 aa13.46□□□□□ -0.25
PTPRU-205ENST00000460170 SIGLEC7Q9Y286 467 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms