RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 FOXK1P85037 733 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 EIF2B1Q14232 305 aaKnown RBP16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 MEP1BQ16820 701 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 CEP78Q5JTW2 689 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 THEM4Q5T1C6 240 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 HES3Q5TGS1 186 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 OR52N5Q8NH56 324 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 C4orf45Q96LM5 186 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 MRPL13Q9BYD1 178 aaKnown RBP16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 RHBDL2Q9NX52 303 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 TBC1D24Q9ULP9 559 aa16.87■□□□□ 0.29
SEMA3D-202ENST00000444867 A0A1W2PQ09 198 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 PIN1P1O15428 100 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 ZIC3O60481 467 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 ZNF254O75437 659 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 RAF1P04049 648 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 ELK1P19419 428 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 NPR2P20594 1047 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 SFTPDP35247 375 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 RIDAP52758 137 aaKnown RBP16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 SPEM2Q0P670 501 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 C19orf57Q0VDD7 668 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 IL18Q14116 193 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 SLC25A35Q3KQZ1 300 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 ACER2Q5QJU3 275 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 ZNF468Q5VIY5 522 aaPredicted RBP16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 TMEM225Q6GV28 225 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 DHRS13Q6UX07 377 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 LRRC69Q6ZNQ3 347 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 GDPD3Q7L5L3 318 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 KRT77Q7Z794 578 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 ZNF676Q8N7Q3 588 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 NOXO1Q8NFA2 376 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 OR6X1Q8NH79 312 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 TRMT10AQ8TBZ6 339 aaKnown RBP16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 HTRA1Q92743 480 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 GNRHR2Q96P88 292 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 ABHD6Q9BV23 337 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 SLITRK2Q9H156 845 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 IRF2BPLQ9H1B7 796 aa16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 ING1Q9UK53 422 aaPredicted RBP16.86■□□□□ 0.29
SEMA3D-202ENST00000444867 PCSK5Q92824 1860 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 A0A1W2PPK0 400 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 TRAF3IP2O43734 574 aaPredicted RBP16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 EIF1BO60739 113 aaKnown RBP16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 IGHG1P01857 330 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 HLA-DQB1P01920 261 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 FREM3P0C091 2139 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 RBMS1P29558 406 aaKnown RBP16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 SRD5A2P31213 254 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 GPR85P60893 370 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 FMODQ06828 376 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 ASAH1Q13510 395 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 RAET1LQ5VY80 246 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 DEGS2Q6QHC5 323 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 LRRN1Q6UXK5 716 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 GLRX5Q86SX6 157 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 GLB1L2Q8IW92 636 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 GPR148Q8TDV2 347 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 SNRNP27Q8WVK2 155 aaKnown RBP16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 SLC25A44Q96H78 314 aaPredicted RBP16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 CMTM3Q96MX0 182 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 FOXN4Q96NZ1 517 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 PIGQQ9BRB3 760 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 MRI1Q9BV20 369 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 EXTL2Q9UBQ6 330 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 OR2M5A3KFT3 312 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 ACOD1A6NK06 481 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 GJE1A6NN92 205 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 MASP2O00187 686 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 GPR171O14626 319 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 RAD1O60671 282 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 ZNF43P17038 809 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 CLRN1P58418 232 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 CSRP2Q16527 193 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 CCBE1Q6UXH8 406 aaPredicted RBP16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 MDGA2Q7Z553 956 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 WDFY1Q8IWB7 410 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 PRSS35Q8N3Z0 413 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 Q8N402 240 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 SAMD12Q8N8I0 201 aa16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 JSRP1Q96MG2 331 aaPredicted RBP16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 NAA11Q9BSU3 229 aaPredicted RBP16.85■□□□□ 0.29
SEMA3D-202ENST00000444867 ALPK2Q86TB3 2170 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 TRBV5-7A0A0A0MS05 114 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 VAMP5O95183 116 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 OPN1LWP04000 364 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 PGA4P0DJD7 388 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 PGA3P0DJD8 388 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 SLC2A2P11168 524 aaPredicted RBP16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 NR2C1P13056 603 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 ATF1P18846 271 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 KIR3DL2P43630 455 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 RAC1P63000 192 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 CSNK2A1P68400 391 aaPredicted RBP16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 B3GNTL1Q67FW5 361 aaPredicted RBP16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 PIP4P1Q86T03 277 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 IP6K3Q96PC2 410 aa16.84■□□□□ 0.29
SEMA3D-202ENST00000444867 MRPS18CQ9Y3D5 142 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms