RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 KCNAB1Q14722 419 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 MST1LQ2TV78 715 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 SCGB2B2Q4G0G5 96 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 PYY3Q5JQD4 70 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 FRRS1Q6ZNA5 592 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 BAP18Q8IXM2 172 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 C15orf40Q8WUR7 153 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 NKX3-1Q99801 234 aaPredicted RBP15.25■□□□□ 0.03
PMS1-213ENST00000441310 SEC61A2Q9H9S3 476 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 OBP2AQ9NY56 170 aa15.25■□□□□ 0.03
PMS1-213ENST00000441310 ARHGEF17Q96PE2 2063 aaPredicted RBP15.25■□□□□ 0.03
PMS1-213ENST00000441310 URADA6NGE7 173 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ZIC2O95409 532 aaPredicted RBP15.24■□□□□ 0.03
PMS1-213ENST00000441310 SLC34A2O95436 690 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 COL9A1P20849 921 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 AK4P27144 223 aaPredicted RBP15.24■□□□□ 0.03
PMS1-213ENST00000441310 NTSP30990 170 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 KIR2DL1P43626 348 aaPredicted RBP15.24■□□□□ 0.03
PMS1-213ENST00000441310 PDX1P52945 283 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 DUSP2Q05923 314 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 NR0B2Q15466 257 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 SSX2Q16385 188 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ZNF776Q68DI1 518 aaPredicted RBP15.24■□□□□ 0.03
PMS1-213ENST00000441310 RHOUQ7L0Q8 258 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 S100PBPQ96BU1 408 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 C20orf24Q9BUV8 137 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 TEX101Q9BY14 249 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 OR2S2Q9NQN1 319 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 CLDND1Q9NY35 253 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 MYO15AQ9UKN7 3530 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 A0A1B0GTI1 187 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 CXorf65A6NEN9 183 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ARGFXA6NJG6 315 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 PPIHO43447 177 aaKnown RBP15.24■□□□□ 0.03
PMS1-213ENST00000441310 XRCC3O43542 346 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 CD74P04233 296 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 CEACAM5P06731 702 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 NME2P22392 152 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 VWA2Q5GFL6 755 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 FAM76BQ5HYJ3 339 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 SLC35F2Q8IXU6 374 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 FRMD1Q8N878 549 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 CA5BP1Q8WTZ4 195 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 AKR1E2Q96JD6 320 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 MENTQ9BUN1 341 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 MS4A8Q9BY19 250 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 TGIF2Q9GZN2 237 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 USP36Q9P275 1121 aaKnown RBP15.24■□□□□ 0.03
PMS1-213ENST00000441310 ATG2AQ2TAZ0 1938 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 C9JQL5 133 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ZNF208O43345 1280 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ZFPL1O95159 310 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 RCBTB2O95199 551 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 AMY2AP04746 511 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ITGB2P05107 769 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 IGFALSP35858 605 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 NANOS3P60323 173 aaKnown RBP15.24■□□□□ 0.03
PMS1-213ENST00000441310 ACTA2P62736 377 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ACTG2P63267 376 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ILF3Q12906 894 aaKnown RBP eCLIP15.24■□□□□ 0.03
PMS1-213ENST00000441310 ARRDC1Q8N5I2 433 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 OR52E2Q8NGJ4 325 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 OR4K13Q8NH42 304 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 ZBTB8AQ96BR9 441 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 MARS2Q96GW9 593 aaKnown RBP15.24■□□□□ 0.03
PMS1-213ENST00000441310 MICU1Q9BPX6 476 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 SEMA6CQ9H3T2 930 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 FGF22Q9HCT0 170 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 UPB1Q9UBR1 384 aa15.24■□□□□ 0.03
PMS1-213ENST00000441310 CACNA1CQ13936 2221 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 KLF8O95600 359 aaPredicted RBP15.23■□□□□ 0.03
PMS1-213ENST00000441310 ACKR3P25106 362 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 CYB5R2Q6BCY4 276 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 IL34Q6ZMJ4 242 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 ABHD13Q7L211 337 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 CCL4L1Q8NHW4 92 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 C1orf198Q9H425 327 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 TMEM100Q9NV29 134 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 MSRAQ9UJ68 235 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 CDV3Q9UKY7 258 aaKnown RBP15.23■□□□□ 0.03
PMS1-213ENST00000441310 FARSAQ9Y285 508 aaKnown RBP15.23■□□□□ 0.03
PMS1-213ENST00000441310 ZNF281Q9Y2X9 895 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 ATG4BQ9Y4P1 393 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 IGKV1-8A0A0C4DH67 115 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 EMC8O43402 210 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 TBX19O60806 448 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 RDH16O75452 317 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 RAB3DO95716 219 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 DCNP07585 359 aaKnown RBP15.23■□□□□ 0.03
PMS1-213ENST00000441310 HOXB2P14652 356 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 GABRG1Q8N1C3 465 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 POMGNT2Q8NAT1 580 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 OR51D1Q8NGF3 324 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 TMEM239Q8WW34 195 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 DCUN1D4Q92564 292 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 CNN2Q99439 309 aaKnown RBP15.23■□□□□ 0.03
PMS1-213ENST00000441310 PRSS27Q9BQR3 290 aa15.23■□□□□ 0.03
PMS1-213ENST00000441310 MUC22E2RYF6 1773 aaPredicted RBP15.23■□□□□ 0.03
PMS1-213ENST00000441310 TERTO14746 1132 aaKnown RBP15.22■□□□□ 0.03
PMS1-213ENST00000441310 EML2O95834 649 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms