RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ATP6AP1Q15904 470 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ETFDHQ16134 617 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ADPRMQ3LIE5 342 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 NKAIN1Q4KMZ8 207 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 HIKESHIQ53FT3 197 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 PDLIM3Q53GG5 364 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MANEAQ5SRI9 462 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SYT6Q5T7P8 510 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 DDI2Q5TDH0 399 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 NXNL2Q5VZ03 156 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM268Q5VZI3 342 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 FAM219BQ5XKK7 198 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 OR5M10Q6IEU7 315 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SLC25A25Q6KCM7 469 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 TMPRSS11BQ86T26 416 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CCDC190Q86UF4 302 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 PAQR7Q86WK9 346 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 KMT5CQ86Y97 462 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 GPSM1Q86YR5 675 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CRLF3Q8IUI8 442 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 LAX1Q8IWV1 398 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 GCNT2Q8N0V5 402 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 DNAJC22Q8N4W6 341 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF611Q8N823 705 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 OR7A2PQ8NGA2 310 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 OR6M1Q8NGM8 313 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CT55Q8WUE5 264 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SFT2D1Q8WV19 159 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 TSEN15Q8WW01 171 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 XAGE5Q8WWM1 108 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 RFT1Q96AA3 541 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM125Q96AQ2 219 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MOB3AQ96BX8 217 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 REPS1Q96D71 796 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ASB9Q96DX5 294 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 LRR1Q96L50 414 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SFXN2Q96NB2 322 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF285Q96NJ3 590 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 RDH12Q96NR8 316 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 PRAP1Q96NZ9 151 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 OR4K3Q96R72 315 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 PRR25Q96S07 402 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 NPAS2Q99743 824 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MACROD1Q9BQ69 325 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 FAM110AQ9BQ89 295 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CPPED1Q9BRF8 314 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MND1Q9BWT6 205 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SGPP1Q9BX95 441 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MRPL13Q9BYD1 178 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ACTRT3Q9BYD9 372 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SPRY4Q9C004 299 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 DERL2Q9GZP9 239 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 METTL9Q9H1A3 318 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SEMA6AQ9H2E6 1030 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MIXL1Q9H2W2 232 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 POPDC3Q9HBV1 291 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 POLE4Q9NR33 117 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 NANSQ9NR45 359 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF224Q9NZL3 707 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CD274Q9NZQ7 290 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 DHCR7Q9UBM7 475 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 TP53TG5Q9Y2B4 290 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 OARD1Q9Y530 152 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SPTBP11277 2137 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SMG1Q96Q15 3661 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 A0A087X0K7 114 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 A0A087X1B8 175 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 FAM240BA0A1B0GVZ2 78 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM89A2RUT3 159 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 MARCH11A6NNE9 402 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PRR23D1E9PI22 279 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 H0YGG7 62 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 H3BMH7 237 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 H7C2Y5 167 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 M0R3G1 203 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 TAPBPO15533 448 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SGCEO43556 437 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 UGDHO60701 494 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PRAF2O60831 178 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 SORBS2O94875 1100 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 HPXP02790 462 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 MT-ND1P03886 318 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 FCER2P06734 321 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ADH4P08319 380 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ANXA5P08758 320 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 STSP08842 583 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 FGF2P09038 288 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 GNAO1P09471 354 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 PRR23D2P0DMB1 279 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CD8BP10966 210 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 FOLR2P14207 255 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 S1PR1P21453 382 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 BGNP21810 368 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 FBLP22087 321 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CRHBPP24387 322 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 ATP5A1P25705 553 aaKnown RBP4.09□□□□□ -1.75
SF3B1-202ENST00000409915 GIFP27352 417 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 CD82P27701 267 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 RFC3P40938 356 aa4.09□□□□□ -1.75
SF3B1-202ENST00000409915 RFX2P48378 723 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms