RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 DCAF10Q5QP82 559 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 ABHD17BQ5VST6 288 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 ZNF227Q86WZ6 799 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 IL22RA1Q8N6P7 574 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 NOXO1Q8NFA2 376 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 OR6X1Q8NH79 312 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 RGP1Q92546 391 aaPredicted RBP16.93■□□□□ 0.3
USP39-202ENST00000409025 KIAA1143Q96AT1 154 aaPredicted RBP16.93■□□□□ 0.3
USP39-202ENST00000409025 ABHD6Q9BV23 337 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 MFRPQ9BY79 579 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 NOX4Q9NPH5 578 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 C14orf119Q9NWQ9 140 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 ABI3Q9P2A4 366 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 IL17BQ9UHF5 180 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 IGKV1D-43A0A0B4J1Z2 117 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 TMEM212A6NML5 194 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 TMCC2O75069 709 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 ZNF432O94892 652 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 HRGP04196 525 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 AZGP1P25311 298 aaKnown RBP16.92■□□□□ 0.3
USP39-202ENST00000409025 CASRP41180 1078 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 CSNK2A1P68400 391 aaPredicted RBP16.92■□□□□ 0.3
USP39-202ENST00000409025 CAMK2DQ13557 499 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 TEX30Q5JUR7 227 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 FDX2Q6P4F2 183 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 CNIH2Q6PI25 160 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 METAP1DQ6UB28 335 aaPredicted RBP16.92■□□□□ 0.3
USP39-202ENST00000409025 GLB1L2Q8IW92 636 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 NKD1Q969G9 470 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 DCBLD2Q96PD2 775 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 NAA11Q9BSU3 229 aaPredicted RBP16.92■□□□□ 0.3
USP39-202ENST00000409025 SP140LQ9H930 580 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 LRFN1Q9P244 771 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 OR4C45A6NMZ5 311 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 AQP8O94778 261 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 PGA4P0DJD7 388 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 PGA3P0DJD8 388 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 CNR1P21554 472 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 ITGA3P26006 1051 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 MAPK3P27361 379 aaPredicted RBP16.92■□□□□ 0.3
USP39-202ENST00000409025 EVX1P49640 407 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 TCF15Q12870 199 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 Q499Y3 187 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 ZNF544Q6NX49 715 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 ZNF676Q8N7Q3 588 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 GDPD1Q8N9F7 314 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 OR52N5Q8NH56 324 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 OR14L1PQ8NHC6 308 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 RNF128Q8TEB7 428 aa16.92■□□□□ 0.3
USP39-202ENST00000409025 SMAD5Q99717 465 aaKnown RBP16.92■□□□□ 0.3
USP39-202ENST00000409025 A0A1B0GTH9 108 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 SPAARA0A1B0GVQ0 90 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 ACOD1A6NK06 481 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 ZNF726A6NNF4 738 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 NOTOA8MTQ0 251 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 FAM25AB3EWG3 89 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 FAM25CB3EWG5 89 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 FAM25GB3EWG6 89 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 RAMP1O60894 148 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 SRMP19623 302 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 THBS2P35442 1172 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 CD97P48960 835 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 RIDAP52758 137 aaKnown RBP16.91■□□□□ 0.3
USP39-202ENST00000409025 GPR85P60893 370 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 GABREP78334 506 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 H3F3AP84243 136 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 AIMP2Q13155 320 aaKnown RBP16.91■□□□□ 0.3
USP39-202ENST00000409025 PCK2Q16822 640 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 SPATC1Q76KD6 591 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 OR10H5Q8NGA6 315 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 KCNE4Q8WWG9 221 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 DERL3Q96Q80 235 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 TIGARQ9NQ88 270 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 WDFY3Q8IZQ1 3526 aa16.91■□□□□ 0.3
USP39-202ENST00000409025 LRRC3CA6NJW4 275 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 PDCD5O14737 125 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 PIN1P1O15428 100 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 VAMP5O95183 116 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 PTTG1O95997 202 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 F10P00742 488 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 KLK2P20151 261 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 PTBP1P26599 531 aaKnown RBP eCLIP16.9■□□□□ 0.3
USP39-202ENST00000409025 CD82P27701 267 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 CD96P40200 585 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 CCR9P51686 369 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 B3GALT5-AS1P59052 145 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 SLC25A35Q3KQZ1 300 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 PYDC2Q56P42 97 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 YRDCQ86U90 279 aaKnown RBP16.9■□□□□ 0.3
USP39-202ENST00000409025 PRSS35Q8N3Z0 413 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 C4orf45Q96LM5 186 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 FER1L6-AS2Q96M78 137 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 DEPPQ9NTK1 212 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 DOCK10Q96BY6 2186 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 FREM3P0C091 2139 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 A0A087WV48 116 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 TRBV5-5A0A0J9YX44 114 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 TLX3O43711 291 aaPredicted RBP16.9■□□□□ 0.3
USP39-202ENST00000409025 LAP3P28838 519 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 CEP78Q5JTW2 689 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms