RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 RPS4Y2Q8TD47 263 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 CCDC59Q9P031 241 aaKnown RBP18.84■□□□□ 0.61
VRK2-201ENST00000340157 LIPGQ9Y5X9 500 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 SPENQ96T58 3664 aaKnown RBP18.84■□□□□ 0.61
VRK2-201ENST00000340157 CD8B2A6NJW9 211 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 UPK3AO75631 287 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 HLA-DPB1P04440 258 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 SPARCP09486 303 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 CD8BP10966 210 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 ENTPD1P49961 510 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 ABLIM2Q6H8Q1 611 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 HDDC2Q7Z4H3 204 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 THEM6Q8WUY1 208 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 ROBO4Q8WZ75 1007 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 HSD17B8Q92506 261 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 RBP7Q96R05 134 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 OR2M2Q96R28 347 aa18.84■□□□□ 0.61
VRK2-201ENST00000340157 SHISA3A0PJX4 238 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 ZNF716A6NP11 495 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 ZNF432O94892 652 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 NANOS3P60323 173 aaKnown RBP18.83■□□□□ 0.6
VRK2-201ENST00000340157 PCK2Q16822 640 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 LRFN4Q6PJG9 635 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 SLC25A47Q6Q0C1 308 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 TMEM178AQ8NBL3 297 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 GHSRQ92847 366 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 MCHR2Q969V1 340 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 SMIM19Q96E16 107 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 MRPL48Q96GC5 212 aaKnown RBP18.83■□□□□ 0.6
VRK2-201ENST00000340157 BARHL1Q9BZE3 327 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 NXF2Q9GZY0 626 aaKnown RBP18.83■□□□□ 0.6
VRK2-201ENST00000340157 TMEM14AQ9Y6G1 99 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 DMXL2Q8TDJ6 3036 aa18.83■□□□□ 0.6
VRK2-201ENST00000340157 MGAQ8IWI9 3026 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 A0A087WV48 116 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 CENPBD1B2RD01 187 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 NPIPA2E9PIF3 369 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 NPIPA3F8WFD2 350 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 ZNF708P17019 499 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 CD53P19397 219 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 NTF4P34130 210 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 EGR3Q06889 387 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 PHYHD1Q5SRE7 291 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 LIPNQ5VXI9 398 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 RPL22L1Q6P5R6 122 aaKnown RBP18.82■□□□□ 0.6
VRK2-201ENST00000340157 GLB1L2Q8IW92 636 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 TMEM123Q8N131 208 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 COQ7Q99807 217 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 SF3B5Q9BWJ5 86 aaKnown RBP18.82■□□□□ 0.6
VRK2-201ENST00000340157 QPCTLQ9NXS2 382 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 SLCO1C1Q9NYB5 712 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 KLHL9Q9P2J3 617 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 APC2O95996 2303 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 ZNF726A6NNF4 738 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 SC5DO75845 299 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 SULT1C4O75897 302 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 RGS9O75916 674 aaPredicted RBP18.82■□□□□ 0.6
VRK2-201ENST00000340157 CLEC2LP0C7M8 214 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 GALP22466 123 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 PMP22Q01453 160 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 CCDC58Q4VC31 144 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 SLC22A16Q86VW1 577 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 FAM109AQ8N4B1 249 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 OR13C5Q8NGS8 318 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 C11orf40Q8WZ69 217 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 KCTD7Q96MP8 289 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 PPIL3Q9H2H8 161 aaKnown RBP18.82■□□□□ 0.6
VRK2-201ENST00000340157 ACKR4Q9NPB9 350 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 FLVCR1Q9Y5Y0 555 aa18.82■□□□□ 0.6
VRK2-201ENST00000340157 PHYHO14832 338 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 CDRT1O95170 752 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 HRGP04196 525 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 EDNRAP25101 427 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 SDC2P34741 201 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 OPRL1P41146 370 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 TGM4P49221 684 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 SELENOPP49908 381 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 GDI2P50395 445 aaKnown RBP18.81■□□□□ 0.6
VRK2-201ENST00000340157 RPS11P62280 158 aaKnown RBP eCLIP18.81■□□□□ 0.6
VRK2-201ENST00000340157 ROR2Q01974 943 aaKnown RBP18.81■□□□□ 0.6
VRK2-201ENST00000340157 SLC18B1Q6NT16 456 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 KCTD20Q7Z5Y7 419 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 YIPF7Q8N8F6 280 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 TMEM54Q969K7 222 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 OR8B4Q96RC9 309 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 SMAD5Q99717 465 aaKnown RBP18.81■□□□□ 0.6
VRK2-201ENST00000340157 PDCD1LG2Q9BQ51 273 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 ABHD6Q9BV23 337 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 GALNT8Q9NY28 637 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 IKZF2Q9UKS7 526 aa18.81■□□□□ 0.6
VRK2-201ENST00000340157 NCOA6Q14686 2063 aaPredicted RBP18.8■□□□□ 0.6
VRK2-201ENST00000340157 RPP14O95059 124 aaKnown RBP18.8■□□□□ 0.6
VRK2-201ENST00000340157 KRT8P05787 483 aa18.8■□□□□ 0.6
VRK2-201ENST00000340157 QDPRP09417 244 aa18.8■□□□□ 0.6
VRK2-201ENST00000340157 SRYQ05066 204 aa18.8■□□□□ 0.6
VRK2-201ENST00000340157 MXD1Q05195 221 aa18.8■□□□□ 0.6
VRK2-201ENST00000340157 EIF2B1Q14232 305 aaKnown RBP18.8■□□□□ 0.6
VRK2-201ENST00000340157 ZNF404Q494X3 552 aa18.8■□□□□ 0.6
VRK2-201ENST00000340157 TEX30Q5JUR7 227 aa18.8■□□□□ 0.6
VRK2-201ENST00000340157 LRRN1Q6UXK5 716 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms