RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PIP5KL1Q5T9C9 394 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 H3F3CQ6NXT2 135 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 DRAXINQ8NBI3 349 aaPredicted RBP11.15□□□□□ -0.63
PCF11-201ENST00000298281 B3GNT7Q8NFL0 401 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 NXT1Q9UKK6 140 aaKnown RBP11.15□□□□□ -0.63
PCF11-201ENST00000298281 SIT1Q9Y3P8 196 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 COL2A1P02458 1487 aaPredicted RBP11.15□□□□□ -0.63
PCF11-201ENST00000298281 A0A0A6YYC8 382 aaPredicted RBP11.15□□□□□ -0.63
PCF11-201ENST00000298281 A0A0B4J203 849 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 I3L1I5 382 aaPredicted RBP11.15□□□□□ -0.63
PCF11-201ENST00000298281 PTGESO14684 152 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 ICMTO60725 284 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 GPR12P47775 334 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 ADGRG5Q8IZF4 528 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 C11orf40Q8WZ69 217 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 GGHQ92820 318 aa11.15□□□□□ -0.63
PCF11-201ENST00000298281 GCSHP23434 173 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 HTR6P50406 440 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 FA2HQ7L5A8 372 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 AGBL5Q8NDL9 886 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 DEFB108BQ8NET1 73 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 NUP37Q8NFH4 326 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 TMEM163Q8TC26 289 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 OR52D1Q9H346 318 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 MOKQ9UQ07 419 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 PEAK1Q9H792 1746 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 F11P03951 625 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 MMP12P39900 470 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 WNT7BP56706 349 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 OR52R1Q8NGF1 315 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 OR6C76A6NM76 312 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 TNFRSF10AO00220 468 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 CLDN2P57739 230 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 RPL22L1Q6P5R6 122 aaKnown RBP11.14□□□□□ -0.63
PCF11-201ENST00000298281 SIAH1Q8IUQ4 282 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 OR56B1Q8NGI3 324 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 ZNF281Q9Y2X9 895 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 TMEM212A6NML5 194 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 G3V3Y1 287 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 SIGLEC6O43699 453 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 OR2C1O95371 312 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 ORM1P02763 201 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 ZNF865P0CJ78 1059 aaPredicted RBP11.14□□□□□ -0.63
PCF11-201ENST00000298281 ADIPOR2Q86V24 386 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 PGBD5Q8N414 524 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 BPIFB2Q8N4F0 458 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 FBXL6Q8N531 539 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 OR5D18Q8NGL1 313 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 OR10R2Q8NGX6 335 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 ELP4Q96EB1 424 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 PDLIM5Q96HC4 596 aaKnown RBP11.14□□□□□ -0.63
PCF11-201ENST00000298281 LRFN3Q9BTN0 628 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 DHRS4Q9BTZ2 278 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 IGHV3-64DA0A0J9YX35 117 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 FABP7O15540 132 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 CPMP14384 443 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 ABCD3P28288 659 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 SOX18P35713 384 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 PRLHRP49683 370 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 C21orf58P58505 322 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 TAS2R45P59539 299 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 ILKQ13418 452 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 PGGHGQ32M88 737 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 LIPIQ6XZB0 460 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 VRK2Q86Y07 508 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 MUC15Q8N387 334 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 PRSS38A1L453 326 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 MS4A18H0YCH9 400 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 RAB5AP20339 215 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 MS4A18Q3C1V0 323 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 RBPMS2Q6ZRY4 209 aaKnown RBP11.14□□□□□ -0.63
PCF11-201ENST00000298281 FRMD1Q8N878 549 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 DYNLRB2Q8TF09 96 aa11.14□□□□□ -0.63
PCF11-201ENST00000298281 YLPM1P49750 1951 aaKnown RBP11.14□□□□□ -0.63
PCF11-201ENST00000298281 IGHV3-9P01782 118 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 CD40P25942 277 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 CMTM4Q8IZR5 234 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 SLC15A4Q8N697 577 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 MIEN1Q9BRT3 115 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 UGT2A1Q9Y4X1 527 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 G3V3Q6 166 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 GALR2O43603 387 aaPredicted RBP11.13□□□□□ -0.63
PCF11-201ENST00000298281 MITFO75030 526 aaPredicted RBP11.13□□□□□ -0.63
PCF11-201ENST00000298281 SCRG1O75711 98 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 C1orf105O95561 183 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 ACP2P11117 423 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 UBE2MP61081 183 aaKnown RBP11.13□□□□□ -0.63
PCF11-201ENST00000298281 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 SLC35E4Q6ICL7 350 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 UTP4Q969X6 686 aaKnown RBP11.13□□□□□ -0.63
PCF11-201ENST00000298281 PAAF1Q9BRP4 392 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 AKIRIN1Q9H9L7 192 aaPredicted RBP11.13□□□□□ -0.63
PCF11-201ENST00000298281 UCK1Q9HA47 277 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 A6NIN4 97 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 UBE2L6O14933 153 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 TGFBR1P36897 503 aa11.13□□□□□ -0.63
PCF11-201ENST00000298281 HNRNPA3P51991 378 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms