RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 OR6C76A6NM76 312 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 ZBTB42B2RXF5 422 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 CSO75390 466 aaKnown RBP12.16□□□□□ -0.46
COL1A1-201ENST00000225964 HBE1P02100 147 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 GLRA1P23415 457 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 OR52I1Q8NGK6 324 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 ADAM19Q9H013 955 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 LYRM4Q9HD34 91 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 DHRS4L1P0CG22 281 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 M6PRP20645 277 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 ARR3P36575 388 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 LSAMPQ13449 338 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 CCSMST1Q4G0I0 132 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 ZMAT1Q5H9K5 638 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 GLYATL3Q5SZD4 288 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 SLC35E1Q96K37 410 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 POFUT1Q9H488 388 aa12.16□□□□□ -0.46
COL1A1-201ENST00000225964 A0A0D9SG52 128 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 TCRBV3S1A0A5B6 114 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 GLAP06280 429 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ADH4P08319 380 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 GDNFP39905 211 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 RFPL4BQ6ZWI9 263 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 BCDIN3DQ7Z5W3 292 aaKnown RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 EGFL6Q8IUX8 553 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 CHTF18Q8WVB6 975 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ZMAT3Q9HA38 289 aaKnown RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 TBC1D29Q9UFV1 150 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 RAB22AQ9UL26 194 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 PCYT1BQ9Y5K3 369 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 MT-ATP6P00846 226 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 HTR1FP30939 366 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 GIPRP48546 466 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 PRAMEF5Q5TYX0 476 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 PRAMEF6Q5VXH4 476 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 LRRC56Q8IYG6 542 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF511Q8NB15 262 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 UBTD2Q8WUN7 234 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF486Q96H40 463 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ZIC5Q96T25 663 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ZPBPQ9BS86 351 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 PLEKHF2Q9H8W4 249 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 TXNL1O43396 289 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 GUSBP08236 651 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 RFC3P40938 356 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 PFN3P60673 137 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 UBE2IP63279 158 aaKnown RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 HSF1Q00613 529 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ELAVL1Q15717 326 aaKnown RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 RTL8BQ17RB0 113 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 SFXN4Q6P4A7 337 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ABHD17CQ6PCB6 329 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ADGRE4PQ86SQ3 457 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 OR2M2Q96R28 347 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 METTL17Q9H7H0 456 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 CHST11Q9NPF2 352 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 QDPRP09417 244 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 CTRB1P17538 263 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 GABRB3P28472 473 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 RPL27P61353 136 aaKnown RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 VWA2Q5GFL6 755 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 CTRB2Q6GPI1 263 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 BCORP1Q8N888 145 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 OR51A2Q8NGJ7 313 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 WFDC5Q8TCV5 224 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 NMES1Q9C002 83 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 TAS2R16Q9NYV7 291 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 TEX51A0A1B0GUA7 166 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 TACR1P25103 407 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 ELLP55199 621 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 SPCS2Q15005 226 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 YOD1Q5VVQ6 348 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 MFSD12Q6NUT3 480 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 NEURL3Q96EH8 262 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 CSF3RQ99062 836 aa12.15□□□□□ -0.46
COL1A1-201ENST00000225964 PATZ1Q9HBE1 687 aaKnown RBP12.15□□□□□ -0.46
COL1A1-201ENST00000225964 GLCEO94923 617 aa12.15□□□□□ -0.47
COL1A1-201ENST00000225964 TRHRP34981 398 aaPredicted RBP12.15□□□□□ -0.47
COL1A1-201ENST00000225964 TMEM240Q5SV17 173 aa12.15□□□□□ -0.47
COL1A1-201ENST00000225964 ANGPTL5Q86XS5 388 aa12.15□□□□□ -0.47
COL1A1-201ENST00000225964 STACQ99469 402 aa12.15□□□□□ -0.47
COL1A1-201ENST00000225964 CGGBP1Q9UFW8 167 aaPredicted RBP12.15□□□□□ -0.47
COL1A1-201ENST00000225964 MUTYHQ9UIF7 546 aa12.15□□□□□ -0.47
COL1A1-201ENST00000225964 MKRN2OSH3BPM6 223 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 PPP3CBP16298 524 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 NPY4RP50391 375 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 OR51H1Q8NH63 302 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 NUDT9Q9BW91 350 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 SEMA4CQ9C0C4 833 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 C20orf202A1L168 122 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 OR2B11Q5JQS5 317 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 Q6ZRG5 221 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 PATE1Q8WXA2 126 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 MYH7BA7E2Y1 1941 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 SLCO2B1O94956 709 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 CR2P20023 1033 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 ETV6P41212 452 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 GPR12P47775 334 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms