RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, human

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHANK2-219	ENST00000606715	HR	O43593	1189 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	RPL35	P42766	123 aa	Known RBP	10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	BAX	Q07812	192 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	ADPRM	Q3LIE5	342 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	CMPK2	Q5EBM0	449 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	UBAC2	Q8NBM4	344 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	LGALS12	Q96DT0	336 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	SLC5A6	Q9Y289	635 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	PPIL1	Q9Y3C6	166 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	HRH3	Q9Y5N1	445 aa		10.12	□□□□□ -0.79
SHANK2-219	ENST00000606715	EVPL	Q92817	2033 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	B4GALT3	O60512	393 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	CEACAM5	P06731	702 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	SFTPC	P11686	197 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ARNT	P27540	789 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZNF718	Q3SXZ3	478 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	FAM74A1	Q5RGS3	127 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	NAA40	Q86UY6	237 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZNF740	Q8NDX6	193 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZNF707	Q96C28	371 aa	Predicted RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	C1orf196	B1AJZ1	125 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	MT-ATP6	P00846	226 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	TFPT	P0C1Z6	253 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	OR10J4	P0C629	311 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	GLRA1	P23415	457 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	SRP9	P49458	86 aa	Known RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	IL13RA1	P78552	427 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	MS4A2	Q01362	244 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	RAB35	Q15286	201 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ELP2	Q6IA86	826 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	CREB3L2	Q70SY1	520 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	SLC38A5	Q8WUX1	472 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	PIGT	Q969N2	578 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	MUL1	Q969V5	352 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ISOC1	Q96CN7	298 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ALG12	Q9BV10	488 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	CHST8	Q9H2A9	424 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	BIN3	Q9NQY0	253 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	PLCXD1	Q9NUJ7	323 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	PCDHGA5	Q9Y5G8	931 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	TIMM10B	Q9Y5J6	103 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	TAF1L	Q8IZX4	1826 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	HS3ST1	O14792	307 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	FAM157B	P0CG42	384 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	OR8G3P	P0DMU2	310 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	HNF1A	P20823	631 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	TACR1	P25103	407 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	PAX6	P26367	422 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	BLVRB	P30043	206 aa	Predicted RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	MRPS10	P82664	201 aa	Known RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	CLN3	Q13286	438 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZNF766	Q5HY98	468 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	PLAG1	Q6DJT9	500 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	TMEM163	Q8TC26	289 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	HPSE2	Q8WWQ2	592 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	SMIM3	Q9BZL3	60 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZNF346	Q9UL40	294 aa	Known RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	POLDIP2	Q9Y2S7	368 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715		F5H5P2	479 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	P2RY10	O00398	339 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	MSTN	O14793	375 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	SULT1B1	O43704	296 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	PRKRA	O75569	313 aa	Known RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	LIPC	P11150	499 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	CSN1S1	P47710	185 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	GAB1	Q13480	694 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	IL34	Q6ZMJ4	242 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	CHDH	Q8NE62	594 aa	Predicted RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	TMIGD2	Q96BF3	282 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	RAB3C	Q96E17	227 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	RBMXL1	Q96E39	390 aa	Known RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ABHD6	Q9BV23	337 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	C19orf53	Q9UNZ5	99 aa	Predicted RBP	10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZNF281	Q9Y2X9	895 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	ATG4B	Q9Y4P1	393 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	A3GALT2	U3KPV4	340 aa		10.11	□□□□□ -0.79
SHANK2-219	ENST00000606715	NAP1L6	A6NFF2	107 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715		F8W036	122 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	NME1	P15531	152 aa	Known RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	PRKACA	P17612	351 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	NFYA	P23511	347 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	NR4A2	P43354	598 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	NKX6-1	P78426	367 aa	Predicted RBP	10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	BLOC1S1	P78537	153 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	ZNF181	Q2M3W8	571 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	PATE1	Q8WXA2	126 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	TNFRSF13C	Q96RJ3	184 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	OCEL1	Q9H607	264 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	SHANK3	Q9BYB0	1731 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715		A0A096LPE4	126 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715		A0A1W2PPZ6	126 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	TMEM212	A6NML5	194 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715		F6UZH7	168 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	HOXB5	P09067	269 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	OR8U8	P0C7N1	319 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	ID4	P47928	161 aa		10.1	□□□□□ -0.79
SHANK2-219	ENST00000606715	LTB	Q06643	244 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms