RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SLC22A10Q63ZE4 541 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR52E8Q6IFG1 317 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 FAAP20Q6NZ36 180 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC48A1Q6P1K1 146 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 FIP1L1Q6UN15 594 aaKnown RBP3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 DGAT2L6Q6ZPD8 337 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 RNF165Q6ZSG1 346 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC22A16Q86VW1 577 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 DOLPP1Q86YN1 238 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR4N5Q8IXE1 308 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 C9orf40Q8IXQ3 194 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR8H2Q8N162 312 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 LRRC25Q8N386 305 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 RIBC1Q8N443 379 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF321PQ8N8H1 164 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF615Q8N8J6 731 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 MAPK1IP1LQ8NDC0 245 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR2M7Q8NG81 312 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR7G1Q8NGA0 311 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR4K14Q8NGD5 310 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 VANGL1Q8TAA9 524 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 FAM57AQ8TBR7 257 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 RDH11Q8TC12 318 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC22A8Q8TCC7 542 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF675Q8TD23 568 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 SELENOMQ8WWX9 145 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 RIT1Q92963 219 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ATP6V1E2Q96A05 226 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ADIPOR1Q96A54 375 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 TM4SF18Q96CE8 201 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ERP27Q96DN0 273 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRIM44Q96DX7 344 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 FAM173AQ9BQD7 235 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 MCRIP2Q9BUT9 160 aaKnown RBP3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR8D2Q9GZM6 311 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ELOVL6Q9H5J4 265 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 CXorf21Q9HAI6 301 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 IL1RL2Q9HB29 575 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 PROK2Q9HC23 129 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 DNAJC4Q9NNZ3 241 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 DEPPQ9NTK1 212 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 CNIH4Q9P003 139 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 PSMC3IPQ9P2W1 217 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 VPS29Q9UBQ0 182 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF639Q9UID6 485 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 PSME2Q9UL46 239 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 NPIPA1Q9UND3 350 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 CFL2Q9Y281 166 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 MEMO1Q9Y316 297 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 MED13LQ71F56 2210 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 ADGRG4Q8IZF6 3080 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 POLQO75417 2590 aa3.05□□□□□ -1.92
CKS1BP3-201ENST00000600888 AKAP6Q13023 2319 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A1B0GTH9 108 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 C2orf92A0A1B0GVN3 265 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PINLYPA6NC86 204 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 GOLGA6L10A6NI86 522 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 C15orf61A6NNL5 157 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 WASHC1A8K0Z3 465 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 KRTAP16-1A8MUX0 517 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 A8MXE2 369 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 G3V2L1 256 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 WWP2O00308 870 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 MANBAO00462 879 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TP53I11O14683 189 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 BCKDKO14874 412 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TFECO14948 347 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PGRMC2O15173 223 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ACOX3O15254 700 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PLIN3O60664 434 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 HCN1O60741 890 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 SH3BGRLO75368 114 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRIM3O75382 744 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ATP6AP2O75787 350 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 BCAS2O75934 225 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 SUPT7LO94864 414 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 NXPH2O95156 264 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 SNX4O95219 450 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 DUS4LO95620 317 aaKnown RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 P04436 131 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 KLK1P06870 262 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 FGF4P08620 206 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 NUDT17P0C025 328 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 RHOXF2BP0C7M4 288 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC2A2P11168 524 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ABOP16442 354 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 CSNK2A2P19784 350 aaPredicted RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 DRD5P21918 477 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PPICP45877 212 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 TMED10P49755 219 aaKnown RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 XKP51811 444 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 CLDN15P56746 228 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PPIAP62937 165 aaKnown RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ERVK-8P63133 956 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 PSPHP78330 225 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 RPP38P78345 283 aaKnown RBP3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 ASPHQ12797 758 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC10A1Q14973 349 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 HEPACAMQ14CZ8 416 aa3.04□□□□□ -1.92
CKS1BP3-201ENST00000600888 CCDC153Q494R4 210 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms