RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ZNF418Q8TF45 676 aaPredicted RBP11.72□□□□□ -0.53
HDAC5-208ENST00000588419 C11orf40Q8WZ69 217 aa11.72□□□□□ -0.53
HDAC5-208ENST00000588419 CGREF1Q99674 301 aa11.72□□□□□ -0.53
HDAC5-208ENST00000588419 ZNF665Q9H7R5 613 aa11.72□□□□□ -0.53
HDAC5-208ENST00000588419 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
HDAC5-208ENST00000588419 ZNF229Q9UJW7 825 aa11.72□□□□□ -0.53
HDAC5-208ENST00000588419 NDUFAF1Q9Y375 327 aa11.72□□□□□ -0.53
HDAC5-208ENST00000588419 LOC105371242A0A075B767 164 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 A0A1W2PRG6 482 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 SHOX2O60902 331 aaPredicted RBP11.71□□□□□ -0.53
HDAC5-208ENST00000588419 RP2O75695 350 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 LYPD3O95274 346 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 SLC2A10O95528 541 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 PNPP00491 289 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 VIMP08670 466 aaKnown RBP11.71□□□□□ -0.53
HDAC5-208ENST00000588419 TNFRSF1BP20333 461 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 TMEM33P57088 247 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 TAS2R41P59536 307 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 RUNX1T1Q06455 604 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 RPL18Q07020 188 aaKnown RBP11.71□□□□□ -0.53
HDAC5-208ENST00000588419 ZP4Q12836 540 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 TOP3AQ13472 1001 aaPredicted RBP11.71□□□□□ -0.53
HDAC5-208ENST00000588419 BEND6Q5SZJ8 279 aaPredicted RBP11.71□□□□□ -0.53
HDAC5-208ENST00000588419 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 LINC00114Q6XXX2 140 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 DEF8Q6ZN54 512 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 USP51Q70EK9 711 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
HDAC5-208ENST00000588419 RETREG3Q86VR2 466 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 SEMA6DQ8NFY4 1073 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 OR1J2Q8NGS2 313 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 OR1J1Q8NGS3 322 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 MCHR2Q969V1 340 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 TAMM41Q96BW9 452 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 LRMDAQ9H2I8 198 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 KCNN2Q9H2S1 579 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 C1orf198Q9H425 327 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 RABEP2Q9H5N1 569 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 CCNB1IP1Q9NPC3 277 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 TRIM33Q9UPN9 1127 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 GMEB1Q9Y692 573 aa11.71□□□□□ -0.53
HDAC5-208ENST00000588419 TRAV20A0A0B4J274 112 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 IGHV1-69-2A0A0G2JMI3 117 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 ISPDA4D126 451 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 CLDN25C9JDP6 229 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 MPZL1O95297 269 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 PTHP01270 115 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 MT-ND5P03915 603 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 ASAH2BP0C7U1 165 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 EPHA1P21709 976 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 CFPP27918 469 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 CDAP32320 146 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 PCGF2P35227 344 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 RAD52P43351 418 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 CD47Q08722 323 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 SLC30A8Q8IWU4 369 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 ZNF519Q8TB69 540 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 ASB10Q8WXI3 467 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 NSMAFQ92636 917 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 RAB39BQ96DA2 213 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 MPP4Q96JB8 637 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 RACGAP1Q9H0H5 632 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 SAP30LQ9HAJ7 183 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 SLCO1C1Q9NYB5 712 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 SH3GLB1Q9Y371 365 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 CACNG2Q9Y698 323 aa11.7□□□□□ -0.54
HDAC5-208ENST00000588419 SPRY3O43610 288 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 TRMUO75648 421 aaKnown RBP11.69□□□□□ -0.54
HDAC5-208ENST00000588419 OR7A10O76100 309 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 ADRA2CP18825 462 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 GCH1P30793 250 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 AQP2P41181 271 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 DAP3P51398 398 aaKnown RBP11.69□□□□□ -0.54
HDAC5-208ENST00000588419 UGT2B15P54855 530 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 UCP2P55851 309 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 LMO4P61968 165 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 MRPS11P82912 194 aaKnown RBP11.69□□□□□ -0.54
HDAC5-208ENST00000588419 TEKQ02763 1124 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 FMODQ06828 376 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 SGCAQ16586 387 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 PCGF3Q3KNV8 242 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 TTMPQ5BVD1 217 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 PABPC1L2AQ5JQF8 200 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 INTS11Q5TA45 600 aaKnown RBP11.69□□□□□ -0.54
HDAC5-208ENST00000588419 ACSM5Q6NUN0 579 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 DPPA2Q7Z7J5 298 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 NKAIN4Q8IVV8 208 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 TMEM255BQ8WV15 326 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 GCDHQ92947 438 aaPredicted RBP11.69□□□□□ -0.54
HDAC5-208ENST00000588419 SGTBQ96EQ0 304 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 ATP6V1G3Q96LB4 118 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 GAL3ST1Q99999 423 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 PLA2G12AQ9BZM1 189 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 NPHS2Q9NP85 383 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 MEPEQ9NQ76 525 aaPredicted RBP11.69□□□□□ -0.54
HDAC5-208ENST00000588419 INIPQ9NRY2 104 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 PCDHB10Q9UN67 800 aa11.69□□□□□ -0.54
HDAC5-208ENST00000588419 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms