RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 TGIF2LYQ8IUE0 185 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 SKA3Q8IX90 412 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 ARIH2OSQ8N7S6 290 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 SYT14Q8NB59 555 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 OR4C15Q8NGM1 316 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 LRGUKQ96M69 825 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 GPA33Q99795 319 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 KCNS3Q9BQ31 491 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 BTBD10Q9BSF8 475 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 TRIM15Q9C019 465 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 NRIP3Q9NQ35 241 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 FBXL3Q9UKT7 428 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 UGT2A1Q9Y4X1 527 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 ATP23Q9Y6H3 246 aa12.56□□□□□ -0.4
MKS1-207ENST00000578789 ARID1AO14497 2285 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 HIVEP1P15822 2718 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 CELSR1Q9NYQ6 3014 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 IGKV1D-43A0A0B4J1Z2 117 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 AQP12BA6NM10 295 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 OR10H3O60404 316 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 FARS2O95363 451 aaKnown RBP12.55□□□□□ -0.4
MKS1-207ENST00000578789 SLC2A10O95528 541 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 STAMBPO95630 424 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 CD79AP11912 226 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 ZNF14P17017 642 aaPredicted RBP12.55□□□□□ -0.4
MKS1-207ENST00000578789 RPL4P36578 427 aaKnown RBP12.55□□□□□ -0.4
MKS1-207ENST00000578789 IFNGR2P38484 337 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 GSSP48637 474 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 ERVK-25P63136 954 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 MRPS34P82930 218 aaKnown RBP12.55□□□□□ -0.4
MKS1-207ENST00000578789 CHRNB3Q05901 458 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 FMODQ06828 376 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 CD47Q08722 323 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 NPRL3Q12980 569 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 Q5PR19 223 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 THEM4Q5T1C6 240 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 AGAP6Q5VW22 663 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 C11orf71Q6IPW1 123 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 C1orf94Q6P1W5 598 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 THSD4Q6ZMP0 1018 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 FOXL2NBQ6ZUU3 175 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 AQP12AQ8IXF9 295 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 ADGRG5Q8IZF4 528 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 NUP37Q8NFH4 326 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 IL17RDQ8NFM7 739 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 NABP1Q96AH0 204 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 PERPQ96FX8 193 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 GRHPRQ9UBQ7 328 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 TMCC3Q9ULS5 477 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 ADAM18Q9Y3Q7 739 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
MKS1-207ENST00000578789 IGHV2OR16-5A0A0B4J2B6 119 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 ARHGEF9O43307 516 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 AHCYL1O43865 530 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 DNAJC8O75937 253 aaPredicted RBP12.54□□□□□ -0.4
MKS1-207ENST00000578789 RAB36O95755 333 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 TXNDC12O95881 172 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 RAP2AP10114 183 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 APEHP13798 732 aaKnown RBP12.54□□□□□ -0.4
MKS1-207ENST00000578789 NPR2P20594 1047 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 SDHAP31040 664 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 PTDSS1P48651 473 aaKnown RBP12.54□□□□□ -0.4
MKS1-207ENST00000578789 FABP6P51161 128 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 MESTQ5EB52 335 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 GPR139Q6DWJ6 353 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 PGBD2Q6P3X8 592 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 SMARCD3Q6STE5 483 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 DPY19L2P2Q6ZN68 376 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 FBXL14Q8N1E6 418 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 MUC15Q8N387 334 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 LINC00471Q8N535 108 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 CLDN22Q8N7P3 220 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 WFDC11Q8NEX6 87 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 OR4F15Q8NGB8 312 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 FGFBP3Q8TAT2 258 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 FANK1Q8TC84 345 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 Q96M85 177 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 ZNF570Q96NI8 536 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 RBP7Q96R05 134 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 TMUB1Q9BVT8 246 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 CBLN4Q9NTU7 201 aa12.54□□□□□ -0.4
MKS1-207ENST00000578789 USF3Q68DE3 2245 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 TEX13CA0A0J9YWL9 993 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 TNFRSF11BO00300 401 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 HOXB6P17509 224 aaKnown RBP12.53□□□□□ -0.4
MKS1-207ENST00000578789 APOBEC3AP31941 199 aaPredicted RBP12.53□□□□□ -0.4
MKS1-207ENST00000578789 GIPRP48546 466 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 RAB1AP62820 205 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 HGFACQ04756 655 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 PIGFQ07326 219 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 TSPAN31Q12999 210 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 KRR1Q13601 381 aaKnown RBP12.53□□□□□ -0.4
MKS1-207ENST00000578789 SLC36A2Q495M3 483 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 OR2T5Q6IEZ7 315 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 ZNF770Q6IQ21 691 aaPredicted RBP12.53□□□□□ -0.4
MKS1-207ENST00000578789 ZNF620Q6ZNG0 422 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 SLC16A14Q7RTX9 510 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 ZNF584Q8IVC4 421 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 OR2T29Q8NH02 315 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 GNPDA2Q8TDQ7 276 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms