RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 CCDC110Q8TBZ0 833 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 DOK4Q8TEW6 326 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ELMO1Q92556 727 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 KRT35Q92764 455 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 IMP4Q96G21 291 aaKnown RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 DCUN1D1Q96GG9 259 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ZSCAN5AQ9BUG6 496 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ACAT2Q9BWD1 397 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 NLNQ9BYT8 704 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 OR52A5Q9H2C5 316 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 KIR3DX1Q9H7L2 352 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 COPS7BQ9H9Q2 264 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 UCK1Q9HA47 277 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 FANCEQ9HB96 536 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 DNAJC11Q9NVH1 559 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 SLC2A6Q9UGQ3 507 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 LEF1Q9UJU2 399 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 NPIPA1Q9UND3 350 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ENTPD4Q9Y227 616 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 LIPT1Q9Y234 373 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 PPIL1Q9Y3C6 166 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 CREBBPQ92793 2442 aa2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ANK3Q12955 4377 aaKnown RBP2.12□□□□□ -2.07
SCFD1-219ENST00000556413 ABCA12Q86UK0 2595 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 DOCK4Q8N1I0 1966 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 A0A0A6YYD4 124 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 A0A0G2JMM0 328 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 A0A0J9YY10 115 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 A0A0U1RQK1 487 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CXorf51AA0A1B0GTR3 108 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 A0A1W2PPB8 328 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 A0A1W2PQ67 120 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 A0A1W2PRS3 328 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 ZNF320A2RRD8 509 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 MGAT4DA6NG13 374 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 OR5K4A6NMS3 321 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 FAM166BA8MTA8 275 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 A8MUA0 341 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 KIR3DP1A8MWS1 328 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 C2orf74A8MZ97 194 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 GOLGA8KD6RF30 607 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 H3BMH7 237 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 GOLGA8TH3BQL2 631 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 H7C0C1 242 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 STX7O15400 261 aaKnown RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 VEGFDO43915 354 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CDC40O60508 579 aaKnown RBP eCLIP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CST8O60676 142 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 DNAJB6O75190 326 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 SRP72O76094 671 aaKnown RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 PROSCO94903 275 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 LRATO95237 230 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 GOT2P00505 430 aaKnown RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 HSPB1P04792 205 aaKnown RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 ALPPP05187 535 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 FCER2P06734 321 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 WNT2P09544 360 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 COX6A1P12074 109 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CCNCP24863 283 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 PCK1P35558 622 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 GRIA1P42261 906 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 ATP5OP48047 213 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 HCAR3P49019 387 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 PRLHRP49683 370 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 ZNF140P52738 457 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 SMSP52788 366 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 AIF1P55008 147 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CSNK1G2P78368 415 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CRADDP78560 199 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 DCDP81605 110 aaKnown RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 XIAPP98170 497 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 OTUD4Q01804 1114 aaKnown RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 KLF5Q13887 457 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CEBPEQ15744 281 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 HADHQ16836 314 aaKnown RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 MICAQ29983 383 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 NKAIN1Q4KMZ8 207 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 BOLA3Q53S33 107 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CCDC183Q5T5S1 534 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 SASS6Q6UVJ0 657 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CD164L2Q6UWJ8 174 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 CES3Q6UWW8 571 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 APOOLQ6UXV4 268 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 KCTD9Q7L273 389 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 PID1Q7Z2X4 250 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 LINC00518Q8N0U6 118 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 OTUD6BQ8N6M0 293 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 BCORP1Q8N888 145 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 ANKRD20A12PQ8NF67 263 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 OR11G2Q8NGC1 345 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 OR6M1Q8NGM8 313 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 OR2Y1Q8NGV0 311 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 SKA2Q8WVK7 121 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 TSLPQ969D9 159 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 OLFM3Q96PB7 478 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 QKIQ96PU8 341 aaKnown RBP eCLIP2.11□□□□□ -2.07
SCFD1-219ENST00000556413 RNF157Q96PX1 679 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 VPS35Q96QK1 796 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 OR5M11Q96RB7 305 aa2.11□□□□□ -2.07
SCFD1-219ENST00000556413 LYSMD1Q96S90 227 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms