RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 AIPO00170 330 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 MAS1P04201 325 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 NAGAP17050 411 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 ADRA2CP18825 462 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 DDOSTP39656 456 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 KIR3DL2P43630 455 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 SUMO3P55854 103 aaPredicted RBP14.66□□□□□ -0.06
COL4A1-204ENST00000543140 WDR38Q5JTN6 314 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 FCRLAQ7L513 359 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 BMPERQ8N8U9 685 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 AGBL5Q8NDL9 886 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 MFSD8Q8NHS3 518 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 TMEM106AQ96A25 262 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 DDIT4LQ96D03 193 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 OR8B4Q96RC9 309 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 COMMD4Q9H0A8 199 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.66□□□□□ -0.06
COL4A1-204ENST00000543140 FBXL2Q9UKC9 423 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 NPIPA1Q9UND3 350 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 SLC22A13Q9Y226 551 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 PCDHGA9Q9Y5G4 932 aaKnown RBP14.66□□□□□ -0.06
COL4A1-204ENST00000543140 WIF1Q9Y5W5 379 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 ALG5Q9Y673 324 aa14.66□□□□□ -0.06
COL4A1-204ENST00000543140 TRAV8-7A0A075B6U6 113 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 UBL3O95164 117 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 CER1O95813 267 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 IGHMP01871 453 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 KLK3P07288 261 aaPredicted RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 EIF2B1Q14232 305 aaKnown RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 PRAMEF20Q5VT98 475 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 OR7E24Q6IFN5 339 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 SLC18B1Q6NT16 456 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 SLC22A8Q8TCC7 542 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 SLC7A6Q92536 515 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 GCDHQ92947 438 aaPredicted RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 EMC6Q9BV81 110 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 RANGRFQ9HD47 186 aaPredicted RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 PTRH2Q9Y3E5 179 aaKnown RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 N6AMT1Q9Y5N5 214 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 TRBV5-5A0A0J9YX44 114 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 TRABD2BA6NFA1 517 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 PHYHO14832 338 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 PNPP00491 289 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 CD83Q01151 205 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 GLO1Q04760 184 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 SLC17A1Q14916 467 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 PLPPR5Q32ZL2 321 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 SLC36A2Q495M3 483 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 UBE2NLQ5JXB2 153 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 PEAR1Q5VY43 1037 aaPredicted RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 ASB10Q8WXI3 467 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 YIPF5Q969M3 257 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 SPACA9Q96E40 222 aaPredicted RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 NECAB3Q96P71 396 aaPredicted RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 DCBLD2Q96PD2 775 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 FYTTD1Q96QD9 318 aaKnown RBP14.65□□□□□ -0.06
COL4A1-204ENST00000543140 SLITRK2Q9H156 845 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 CACNG2Q9Y698 323 aa14.65□□□□□ -0.06
COL4A1-204ENST00000543140 TMEM212A6NML5 194 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 NTN3O00634 580 aaPredicted RBP14.64□□□□□ -0.07
COL4A1-204ENST00000543140 FBXO45P0C2W1 286 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 MAPK3P27361 379 aaPredicted RBP14.64□□□□□ -0.07
COL4A1-204ENST00000543140 DPP4P27487 766 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 RCVRNP35243 200 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 CLDN20P56880 219 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 HSF1Q00613 529 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 MRPL28Q13084 256 aaKnown RBP14.64□□□□□ -0.07
COL4A1-204ENST00000543140 PCOLCEQ15113 449 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 KRT77Q7Z794 578 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 POC1BQ8TC44 478 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 HAVCR2Q8TDQ0 301 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 C4orf45Q96LM5 186 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 MARVELD1Q9BSK0 173 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 ABHD6Q9BV23 337 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 CHST11Q9NPF2 352 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 IGKV1D-43A0A0B4J1Z2 117 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 LIPT2A6NK58 231 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 H0YC42 278 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 MASP2O00187 686 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 DOK2O60496 412 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 UMODP07911 640 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 SDHBP21912 280 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 SLC6A1P30531 599 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 RASGEF1BQ0VAM2 473 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 MYBPHQ13203 477 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 TCEAL6Q6IPX3 200 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF679Q8IYX0 411 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 GPR148Q8TDV2 347 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 RNF138Q8WVD3 245 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 TSEN15Q8WW01 171 aaKnown RBP14.64□□□□□ -0.07
COL4A1-204ENST00000543140 TCEAL3Q969E4 200 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 SLC25A38Q96DW6 304 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 SNX18Q96RF0 628 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 AUNIPQ9H7T9 357 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 CAMK2AQ9UQM7 478 aa14.64□□□□□ -0.07
COL4A1-204ENST00000543140 NCOR1O75376 2440 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF208O43345 1280 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 ZNF254O75437 659 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 CRABP1P29762 137 aa14.63□□□□□ -0.07
COL4A1-204ENST00000543140 PITPNAQ00169 270 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms