RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 LINGO2Q7L985 606 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.45□□□□□ -1.7
HDAC6-223ENST00000480525 DTX2Q86UW9 622 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 UBE2J2Q8N2K1 259 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 SLC22A24Q8N4F4 322 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 C10orf53Q8N6V4 93 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 PACRGLQ8N7B6 248 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 WDR31Q8NA23 367 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 AQP11Q8NBQ7 271 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 OR4F15Q8NGB8 312 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 OR10G2Q8NGC3 310 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 OR13C2Q8NGS9 318 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 OR6N1Q8NGY5 312 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 RNF217Q8TC41 542 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 FANK1Q8TC84 345 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 TRUB1Q8WWH5 349 aaKnown RBP4.45□□□□□ -1.7
HDAC6-223ENST00000480525 MCHR2Q969V1 340 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 FAM46AQ96IP4 442 aaKnown RBP4.45□□□□□ -1.7
HDAC6-223ENST00000480525 COG8Q96MW5 612 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF570Q96NI8 536 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 WFIKKN1Q96NZ8 548 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 ALKBH3Q96Q83 286 aaPredicted RBP4.45□□□□□ -1.7
HDAC6-223ENST00000480525 TSPAN32Q96QS1 320 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 TNFRSF13CQ96RJ3 184 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 DCLRE1CQ96SD1 692 aaKnown RBP4.45□□□□□ -1.7
HDAC6-223ENST00000480525 FEVQ99581 238 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 RBM4BQ9BQ04 359 aaKnown RBP4.45□□□□□ -1.7
HDAC6-223ENST00000480525 RBM4Q9BWF3 364 aaKnown RBP4.45□□□□□ -1.7
HDAC6-223ENST00000480525 GABARAPL3Q9BY60 117 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 NMNAT2Q9BZQ4 307 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 CXXC4Q9H2H0 198 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 C12orf49Q9H741 205 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 PLEKHF2Q9H8W4 249 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 MARCH7Q9H992 704 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF556Q9HAH1 456 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 NTN4Q9HB63 628 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 MED29Q9NX70 200 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 RHCGQ9UBD6 479 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 REV1Q9UBZ9 1251 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 SEC14L4Q9UDX3 406 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 CGGBP1Q9UFW8 167 aaPredicted RBP4.45□□□□□ -1.7
HDAC6-223ENST00000480525 PRSS50Q9UI38 385 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 KLHL21Q9UJP4 597 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 CLEC4AQ9UMR7 237 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 MOKQ9UQ07 419 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 UGT2A1Q9Y4X1 527 aa4.45□□□□□ -1.7
HDAC6-223ENST00000480525 TRAV27A0A087WT01 109 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 IGLV1-36A0A0B4J1U3 117 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 C12orf71A8MTZ7 269 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 LRRN3E7EW58 273 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 G3V2T6 193 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 H0YJX3 145 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 H3BNX3 289 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 PYCARD-AS1I3L0S3 204 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 KPNA4O00629 521 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 GNGT2O14610 69 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 PIP5K1CO60331 668 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 E2F6O75461 281 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 LYZL6O75951 148 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 GASTP01350 101 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 IFNGP01579 166 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 CRYAAP02489 173 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 SERPINA5P05154 406 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 F13BP05160 661 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 ALPLP05186 524 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 CD3EP07766 207 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 MMP7P09237 267 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 QDPRP09417 244 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF14P17017 642 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 CDH2P19022 906 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 MSR1P21757 451 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 FUT4P22083 530 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 EDNRAP25101 427 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 CD40P25942 277 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 LAP3P28838 519 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 OTX1P32242 354 aaPredicted RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 RPL4P36578 427 aaKnown RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 ACVR1BP36896 505 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 GPR4P46093 362 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 YAP1P46937 504 aaKnown RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 CLRN1P58418 232 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 UBE2NP61088 152 aaKnown RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 RPS23P62266 143 aaKnown RBP4.44□□□□□ -1.7
HDAC6-223ENST00000480525 LSM11P83369 360 aaKnown RBP eCLIP4.44□□□□□ -1.79e-7■■■■□ 19.6
HDAC6-223ENST00000480525 EFNB1P98172 346 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 TEKQ02763 1124 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 HSF2Q03933 536 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 SCRN3Q0VDG4 424 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 ECH1Q13011 328 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 LAPTM4AQ15012 233 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 EFNB3Q15768 340 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 GSG1Q2KHT4 349 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 SLC36A3Q495N2 470 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 MESTQ5EB52 335 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 SLC35D3Q5M8T2 416 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 TBPL2Q6SJ96 375 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 PRSS57Q6UWY2 283 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 PLXDC2Q6UX71 529 aa4.44□□□□□ -1.7
HDAC6-223ENST00000480525 PAMR1Q6UXH9 720 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms