RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CRYBA2P53672 197 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 CCL8P80075 99 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 MRPS11P82912 194 aaKnown RBP18.01■□□□□ 0.47
COL9A3-207ENST00000467819 RPL18Q07020 188 aaKnown RBP18.01■□□□□ 0.47
COL9A3-207ENST00000467819 VMACQ2NL98 169 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 TMEM154Q6P9G4 183 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 RBM15BQ8NDT2 890 aaKnown RBP18.01■□□□□ 0.47
COL9A3-207ENST00000467819 PFN4Q8NHR9 129 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 STON2Q8WXE9 905 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 LRRC37BQ96QE4 947 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 NPHS2Q9NP85 383 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 HINT3Q9NQE9 182 aaKnown RBP18.01■□□□□ 0.47
COL9A3-207ENST00000467819 GPR160Q9UJ42 338 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 GRIP1Q9Y3R0 1128 aa18.01■□□□□ 0.47
COL9A3-207ENST00000467819 IQCMA0A1B0GVH7 501 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 A0A1W2PRG6 482 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 PTHP01270 115 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 VIMP08670 466 aaKnown RBP18■□□□□ 0.47
COL9A3-207ENST00000467819 ZNF250P15622 560 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 TNFRSF1BP20333 461 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 UGT2B15P54855 530 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 PLP2Q04941 152 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 HIST3H3Q16695 136 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 SHQ1Q6PI26 577 aaKnown RBP18■□□□□ 0.47
COL9A3-207ENST00000467819 DPPA2Q7Z7J5 298 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 NKAIN4Q8IVV8 208 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18■□□□□ 0.47
COL9A3-207ENST00000467819 OR1J2Q8NGS2 313 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 OR51F2Q8NH61 342 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 RASSF5Q8WWW0 418 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 ASB10Q8WXI3 467 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 C11orf40Q8WZ69 217 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 SH3GLB1Q9Y371 365 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 TENM1Q9UKZ4 2725 aa18■□□□□ 0.47
COL9A3-207ENST00000467819 IGLV3-9A0A075B6K5 115 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 SHOX2O60902 331 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-207ENST00000467819 TRMUO75648 421 aaKnown RBP17.99■□□□□ 0.47
COL9A3-207ENST00000467819 VENTXO95231 258 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 SNAP29O95721 258 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 MT-ND1P03886 318 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 FUT1P19526 365 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 AQP2P41181 271 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 GZMMP51124 257 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 UCP2P55851 309 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 TAS2R41P59536 307 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 LMO4P61968 165 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 HSF2Q03933 536 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 GLO1Q04760 184 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 AVPI1Q5T686 147 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 THSD4Q6ZMP0 1018 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 DEF8Q6ZN54 512 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 ZNF519Q8TB69 540 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 TSPEARQ8WU66 669 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 TMEM255BQ8WV15 326 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 GTF3AQ92664 365 aaKnown RBP17.99■□□□□ 0.47
COL9A3-207ENST00000467819 MAGEB18Q96M61 343 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 LRMDAQ9H2I8 198 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 NANOGQ9H9S0 305 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 INIPQ9NRY2 104 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 SLCO1C1Q9NYB5 712 aa17.99■□□□□ 0.47
COL9A3-207ENST00000467819 A0A0G2JND7 137 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 TPD52L2O43399 206 aaKnown RBP17.98■□□□□ 0.47
COL9A3-207ENST00000467819 RGS9O75916 674 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-207ENST00000467819 OR7A10O76100 309 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 SLC2A10O95528 541 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 ACADSP16219 412 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 CCNOP22674 350 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 APLNRP35414 380 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 RAD52P43351 418 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 DAP3P51398 398 aaKnown RBP17.98■□□□□ 0.47
COL9A3-207ENST00000467819 MVKQ03426 396 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 NRN1LQ496H8 165 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 RABL3Q5HYI8 236 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 CCDC80Q76M96 950 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 MEX3DQ86XN8 651 aaKnown RBP17.98■□□□□ 0.47
COL9A3-207ENST00000467819 SGTBQ96EQ0 304 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 MRPL13Q9BYD1 178 aaKnown RBP17.98■□□□□ 0.47
COL9A3-207ENST00000467819 BCL2L14Q9BZR8 327 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 C20orf141Q9NUB4 165 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 DYSFO75923 2080 aa17.98■□□□□ 0.47
COL9A3-207ENST00000467819 FBP2O00757 339 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 MMP7P09237 267 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-207ENST00000467819 DRD4P21917 467 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 CDAP32320 146 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 PCGF3Q3KNV8 242 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 PABPC1L2AQ5JQF8 200 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 NANOGP8Q6NSW7 305 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 FAHD2BQ6P2I3 314 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-207ENST00000467819 HDDC2Q7Z4H3 204 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 OR1J1Q8NGS3 322 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 MOSPD2Q8NHP6 518 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 FAHD2AQ96GK7 314 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 SEPHS2Q99611 448 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 KCNN2Q9H2S1 579 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 ZNF665Q9H7R5 613 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 CCNB1IP1Q9NPC3 277 aa17.97■□□□□ 0.47
COL9A3-207ENST00000467819 ARHGAP32A7KAX9 2087 aa17.96■□□□□ 0.47
COL9A3-207ENST00000467819 TRAV20A0A0B4J274 112 aa17.96■□□□□ 0.47
COL9A3-207ENST00000467819 IGHV1-69-2A0A0G2JMI3 117 aa17.96■□□□□ 0.47
COL9A3-207ENST00000467819 EDF1O60869 148 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms