RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 OBSL1O75147 1896 aa3.11□□□□□ -1.91
SORT1-202ENST00000466471 SONP18583 2426 aaKnown RBP3.11□□□□□ -1.91
SORT1-202ENST00000466471 TRAV1-2A0A0B4J238 106 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 A0A0G2JK05 382 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 RAB19A4D1S5 217 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 MTMR11A4FU01 709 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 TRAPPC13A5PLN9 417 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 RNF222A6NCQ9 220 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 OR51F1A6NGY5 319 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SLC9B1P1A6NJY1 282 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 GABRR3A8MPY1 467 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 ANKRD66B4E2M5 251 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 D6RAR5 112 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 C1QTNF3-AMACRE9PGA6 284 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 OVOL3O00110 214 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 FOXE1O00358 373 aaPredicted RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 CLDN5O00501 218 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 PTGESO14684 152 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 ZNF197O14709 1029 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 FFAR1O14842 300 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SCAMP2O15127 329 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 SMAD9O15198 467 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 INSIG1O15503 277 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 RGS5O15539 181 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 CHST10O43529 356 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HCRTO43612 131 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 FOXS1O43638 330 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 KDELR3O43731 214 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 EIF4E2O60573 245 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 RDH16O75452 317 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SCO1O75880 301 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SPDEFO95238 335 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 CSF2P04141 144 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 C8GP07360 202 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HIST1H2AGP0C0S8 130 aaPredicted RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 ZDHHC11BP0C7U3 371 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 LIMS3P0CW19 117 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 LIMS4P0CW20 117 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 TFPIP10646 304 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HAPLN1P10915 354 aaPredicted RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 GABRA1P14867 456 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 RPS2P15880 293 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 ZNF7P17097 686 aaPredicted RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 GJA1P17302 382 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 NDUFB7P17568 137 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HLA-GP17693 338 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 GSTM3P21266 225 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 DNASE1P24855 282 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HOXD9P28356 352 aaPredicted RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 CCR7P32248 378 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 MC5RP33032 325 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 CHI3L1P36222 383 aaPredicted RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 FRKP42685 505 aaPredicted RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 CSNK1DP48730 415 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 IDH2P48735 452 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 PITPNBP48739 271 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 RAB13P51153 203 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 BLVRAP53004 296 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 CRYBB1P53674 252 aaPredicted RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 CLDN2P57739 230 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 KIAA1024LP59773 190 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 ZP1P60852 638 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SSTP61278 116 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SNRPD2P62316 118 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 MRPS10P82664 201 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 HTD2P86397 168 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 PITPNAQ00169 270 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 FABP5Q01469 135 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HMGCS1Q01581 520 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 RUNX2Q13950 521 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 GNA13Q14344 377 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 KRT33BQ14525 404 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HEPACAMQ14CZ8 416 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 PPA1Q15181 289 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 P2RY14Q15391 338 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 STK11Q15831 433 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 ETFDHQ16134 617 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 EXOC3L2Q2M3D2 409 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HFEQ30201 348 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 ITPRIPL2Q3MIP1 535 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SYT14P1Q58G82 188 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 IGSF11Q5DX21 431 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 RNASE12Q5GAN4 147 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 XKR6Q5GH73 641 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 MS4A13Q5J8X5 152 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 DNLZQ5SXM8 178 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 PDSS1Q5T2R2 415 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 GCNT6Q5T4J0 391 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HENMT1Q5T8I9 393 aaKnown RBP3.1□□□□□ -1.91
SORT1-202ENST00000466471 PRAMEF8Q5VWM4 474 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 PRAMEF7Q5VXH5 474 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 FAM219BQ5XKK7 198 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 FRG2Q64ET8 278 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 OLFML2AQ68BL7 652 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 HIST2H2AA3Q6FI13 130 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 TRIM40Q6P9F5 258 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SCIMPQ6UWF3 145 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 FAM198BQ6UWH4 519 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 WASH2PQ6VEQ5 465 aa3.1□□□□□ -1.91
SORT1-202ENST00000466471 SLC36A4Q6YBV0 504 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms