RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 EIF3GO75821 320 aaKnown RBP eCLIP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SC5DO75845 299 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 PLEKHA8P1O95397 391 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 FADS2O95864 444 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 AMBPP02760 352 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 CT45A6P0DMU7 189 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 CT45A5P0DMU8 189 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 CT45A7P0DMV0 189 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 FOLR1P15328 257 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 KIR2DS4P43632 304 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SKP1P63208 163 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SP4Q02446 784 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SLC25A11Q02978 314 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF763Q0D2J5 394 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 PMS2P3Q13401 168 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 C5orf64Q2M2E5 130 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 CT45A1Q5HYN5 189 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 NHLRC3Q5JS37 347 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 MARCH8Q5T0T0 291 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 ADNP2Q6IQ32 1131 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 TMEM135Q86UB9 458 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF547Q8IVP9 402 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 ZBED8Q8IZ13 594 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 KIF2BQ8N4N8 673 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 CSNK1G2-AS1Q8NCQ2 148 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 OR2AP1Q8NGE2 309 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 OR6T1Q8NGN1 323 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 CT45A3Q8NHU0 189 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 FRAT1Q92837 279 aaPredicted RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 TNFRSF14Q92956 283 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 ITFG2Q969R8 447 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF597Q96LX8 424 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 PELOQ9BRX2 385 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 HDHD2Q9H0R4 259 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 UPF3AQ9H1J1 476 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SIAEQ9HAT2 523 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SDF2L1Q9HCN8 221 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SAMSN1Q9NSI8 373 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 NECAP2Q9NVZ3 263 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SLC17A7Q9P2U7 560 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF282Q9UDV7 671 aaPredicted RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 GNPTGQ9UJJ9 305 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 NXT1Q9UKK6 140 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 SCML1Q9UN30 329 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 PPIL1Q9Y3C6 166 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 FANCIQ9NVI1 1328 aa4.1□□□□□ -1.75
TM9SF3-202ENST00000443638 IGHV1OR15-1A0A075B7D0 117 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 A0A1B0GW15 77 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 PSMB11A5LHX3 300 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 EFCAB7A8K855 629 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 LYRM9A8MSI8 78 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 H0YHG0 523 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 H7C0C1 242 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 PLPP1O14494 284 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 PRMT5O14744 637 aaPredicted RBP4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 TNFSF11O14788 317 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 SNAI2O43623 268 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 VENTXO95231 258 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 TDP2O95551 362 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 LSM8O95777 96 aaKnown RBP4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 IGLV1-44P01699 117 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 GLAP06280 429 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF250P15622 560 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 SLC2A5P22732 501 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 KLK7P49862 253 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ATP12AP54707 1039 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 UGT2B15P54855 530 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ACTA2P62736 377 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ACTG2P63267 376 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ACTC1P68032 377 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ACTA1P68133 377 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF92Q03936 586 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ZNF726P1Q15940 193 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 PTPN20Q4JDL3 420 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 PAN3Q58A45 887 aaKnown RBP4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 OLFML2AQ68BL7 652 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 TMUB2Q71RG4 321 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 OR10G3Q8NGC4 313 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 OR6N2Q8NGY6 317 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 CCDC26Q8TAB7 109 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ACER1Q8TDN7 264 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 TMEM239Q8WW34 195 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 OR8D1Q8WZ84 308 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 GTF2H4Q92759 462 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 TMEM54Q969K7 222 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 COL21A1Q96P44 957 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 SERPINB12Q96P63 405 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 OR5B12Q96R08 314 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 NODALQ96S42 347 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 RANBP9Q96S59 729 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 C1orf198Q9H425 327 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 EML4Q9HC35 981 aaKnown RBP4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 CTPS2Q9NRF8 586 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 RMND1Q9NWS8 449 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 ARMCX1Q9P291 453 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 RNF7Q9UBF6 113 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 V9GYY9 64 aa4.09□□□□□ -1.75
TM9SF3-202ENST00000443638 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
TM9SF3-202ENST00000443638 KIR2DL5BA0A0G2JN68 375 aa4.08□□□□□ -1.76
TM9SF3-202ENST00000443638 KIR2DL5BA0A0G2JPC4 375 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms