RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 GAGE7O76087 117 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 CLDN14O95500 239 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 SERPINA5P05154 406 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 HOXB7P09629 217 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ACSM4P0C7M7 580 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DUX4L2P0CJ85 424 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DUX4L3P0CJ86 424 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DUX4L4P0CJ87 422 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DUX4L5P0CJ88 424 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DUX4L6P0CJ89 424 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DUX4L7P0CJ90 424 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 GAGE12FP0CL80 117 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 GAGE12GP0CL81 117 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 GAGE12IP0CL82 117 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ZNF35P13682 527 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 CSNK2A2P19784 350 aaPredicted RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ME2P23368 584 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 MPGP29372 298 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ZFP36L2P47974 494 aaKnown RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 HILS1P60008 231 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ZNF85Q03923 595 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ARL16Q0P5N6 197 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ZNF155Q12901 538 aaPredicted RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 MLLT11Q13015 90 aaPredicted RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 GAGE1Q13065 139 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 GAGE4Q13068 117 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ASAH1Q13510 395 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 RAB31Q13636 194 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 OXA1LQ15070 435 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 CD226Q15762 336 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 UNC50Q53HI1 259 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 LPCAT4Q643R3 524 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DNM1P34Q6PK57 102 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DUX4L9Q6RFH8 374 aaPredicted RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 PRSS48Q7RTY5 328 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 S100A7AQ86SG5 101 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 TMEM219Q86XT9 240 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 NAXDQ8IW45 347 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 RIBC1Q8N443 379 aaPredicted RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 PRELID2Q8N945 189 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 SEMA6DQ8NFY4 1073 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 OR51A7Q8NH64 312 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 NEK7Q8TDX7 302 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 OR5P2Q8WZ92 322 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 NDRG1Q92597 394 aaKnown RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 FBXO17Q96EF6 278 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DNAJA3Q96EY1 480 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 C17orf77Q96MU5 243 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 RBKSQ9H477 322 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 CWH43Q9H720 699 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 SDHAF2Q9NX18 166 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 TEX10Q9NXF1 929 aaPredicted RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 THUMPD1Q9NXG2 353 aaKnown RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 WRAP73Q9P2S5 460 aaPredicted RBP4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DUX4Q9UBX2 424 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 KCNS2Q9ULS6 477 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 COPS3Q9UNS2 423 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ERVW-1Q9UQF0 538 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 SNX24Q9Y343 169 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 MROH7Q68CQ1 1323 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 MAPK8IP3Q9UPT6 1336 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 FRMPD3Q5JV73 1810 aa4.67□□□□□ -1.66
PTP4A1P1-201ENST00000420539 CNTNAP1P78357 1384 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 PLEKHH1Q9ULM0 1364 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 A0A1B0GU03 582 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 hCG_38984A0A1B0GV85 526 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 LINC01548A6NM66 108 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 EFCAB7A8K855 629 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ZNF814B7Z6K7 855 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 F5H768 121 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 J3QLI3 93 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 INPP4BO15327 924 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 HPGDSO60760 199 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 SRP72O76094 671 aaKnown RBP4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 CDK1P06493 297 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 IGHV4-30-4P0DP06 118 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 M6PRP20645 277 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 C21orf33P30042 268 aaPredicted RBP4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 RHOAP61586 193 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 RPS13P62277 151 aaKnown RBP4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 RPL31P62899 125 aaKnown RBP4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 SSBP2P81877 361 aaPredicted RBP4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 PRKCDQ05655 676 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DYNC1I2Q13409 638 aaKnown RBP4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 GGTLC2Q14390 218 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 POU2AF1Q16633 256 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ACSM3Q53FZ2 586 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 DCST2Q5T1A1 773 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ZNF66Q6ZN08 573 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 FRRS1Q6ZNA5 592 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 ACOT7LQ6ZUV0 252 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 CALHM1Q8IU99 346 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 TRAPPC5Q8IUR0 188 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 FAM71AQ8IYT1 594 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 STPG2Q8N412 459 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 EID2Q8N6I1 236 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 OR2T33Q8NG76 320 aa4.66□□□□□ -1.66
PTP4A1P1-201ENST00000420539 OR9Q2Q8NGE9 314 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 214.2 ms