RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 MMP21Q8N119 569 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 CISD2Q8N5K1 135 aaKnown RBP12.82□□□□□ -0.36
RERE-204ENST00000400908 OR51A2Q8NGJ7 313 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 SLC7A6Q92536 515 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 LYSMD1Q96S90 227 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 MENTQ9BUN1 341 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 LINC00597Q9H2U6 94 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 POFUT1Q9H488 388 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 PCDHGA9Q9Y5G4 932 aaKnown RBP12.82□□□□□ -0.36
RERE-204ENST00000400908 C4orf47A7E2U8 309 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 IQCJQ1A5X6 159 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 ACOT6Q3I5F7 207 aaPredicted RBP12.82□□□□□ -0.36
RERE-204ENST00000400908 Q499Y3 187 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 C9orf135Q5VTT2 229 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 TOMM20LQ6UXN7 152 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 AGPAT4Q9NRZ5 378 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 P4HTMQ9NXG6 502 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 GDF2Q9UK05 429 aaPredicted RBP12.82□□□□□ -0.36
RERE-204ENST00000400908 RNF150Q9ULK6 438 aa12.82□□□□□ -0.36
RERE-204ENST00000400908 ZNF443Q9Y2A4 671 aaPredicted RBP12.82□□□□□ -0.36
RERE-204ENST00000400908 PRAMEF25A6NGN4 478 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 ZNF593O00488 134 aaPredicted RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 COCHO43405 550 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 AREGP15514 252 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 PLK5Q496M5 336 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 PRAMEF5Q5TYX0 476 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 PRAMEF6Q5VXH4 476 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 DPPA4Q7L190 304 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 NLRC3Q7RTR2 1065 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OR2A1Q8NGT9 310 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 ATP13A2Q9NQ11 1180 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 SPHK2Q9NRA0 654 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 MUTYHQ9UIF7 546 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 MOKQ9UQ07 419 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 DDX60LQ5H9U9 1706 aaKnown RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 GJB5O95377 273 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 ACSM4P0C7M7 580 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 AKR1C3P42330 323 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OR1D4P47884 311 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 NPY4RP50391 375 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 HTR6P50406 440 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 LCN15Q6UWW0 184 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 SEH1LQ96EE3 360 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 TOLLIPQ9H0E2 274 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 SLC25A32Q9H2D1 315 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 RIMS4Q9H426 269 aaPredicted RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 NXT1Q9UKK6 140 aaKnown RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 SPO11Q9Y5K1 396 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 KAT6AQ92794 2004 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 TUBAL3A6NHL2 446 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 A6NL46 340 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OR5G3P0C626 314 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 ZNF91Q05481 1191 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 MFAP5Q13361 173 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OR1Q1Q15612 314 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 C18orf21Q32NC0 220 aaPredicted RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 ZNF542PQ5EBM4 170 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OR2G6Q5TZ20 316 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 UBE3DQ7Z6J8 389 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 CLDN22Q8N7P3 220 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OR2AE1Q8NHA4 323 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 DYNC2LI1Q8TCX1 351 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■■■□□ 18.4
RERE-204ENST00000400908 DVL3Q92997 716 aaPredicted RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 SPATA6Q9NWH7 488 aaPredicted RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 ABOP16442 354 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 RPS25P62851 125 aaKnown RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 PRSS35Q8N3Z0 413 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OR5D18Q8NGL1 313 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OR6K3Q8NGY3 331 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 SMIM7Q9BQ49 75 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 BARHL1Q9BZE3 327 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 OBP2AQ9NY56 170 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 ZBTB42B2RXF5 422 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 GATCO43716 136 aaKnown RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 ALX3O95076 343 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 DDOSTP39656 456 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 ETFDHQ16134 617 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 MOGAT2Q3SYC2 334 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 NCR3LG1Q68D85 454 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 FRMPD2BQ6IN97 320 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 MFSD12Q6NUT3 480 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 GRINAQ7Z429 371 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 KLHDC8BQ8IXV7 354 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 CELF2-AS1Q8N7Q2 184 aa12.81□□□□□ -0.36
RERE-204ENST00000400908 C11orf54Q9H0W9 315 aaPredicted RBP12.81□□□□□ -0.36
RERE-204ENST00000400908 A0A1W2PPQ1 181 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 OR2F2O95006 317 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 LGI1O95970 557 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 FBP1P09467 338 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 PMCHP20382 165 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 OPRD1P41143 372 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 CCR6P51684 374 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 NHLH1Q02575 133 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 NHLH2Q02577 135 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 OR2F1Q13607 317 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 SMAD2Q15796 467 aaKnown RBP12.8□□□□□ -0.36
RERE-204ENST00000400908 OR52R1Q8NGF1 315 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 ARRDC3Q96B67 414 aa12.8□□□□□ -0.36
RERE-204ENST00000400908 VAPAQ9P0L0 249 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms