RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 UNC50Q53HI1 259 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 DHRS7BQ6IAN0 325 aaPredicted RBP8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 VTCN1Q7Z7D3 282 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 NOXA1Q86UR1 476 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 LSRQ86X29 649 aaPredicted RBP8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 LINC00346Q8IVM7 164 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 FITM2Q8N6M3 262 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 SLC35G3Q8N808 338 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 OR13D1Q8NGV5 346 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 OR6S1Q8NH40 331 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 AP1S3Q96PC3 154 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 TTTY12Q9BZ98 90 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 MEPEQ9NQ76 525 aaPredicted RBP8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 TINAGQ9UJW2 476 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 PPP1R3CQ9UQK1 317 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 BRWD3Q6RI45 1802 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 PROB1E7EW31 1015 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 TK1P04183 234 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 VMACQ2NL98 169 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 NADK2Q4G0N4 442 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 ZNF573Q86YE8 665 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 FDCSPQ8NFU4 85 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 INPP5KQ9BT40 448 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 ADAT1Q9BUB4 502 aaKnown RBP8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 OPN3Q9H1Y3 402 aaPredicted RBP8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 WDR54Q9H977 334 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 OR2W5A6NFC9 320 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 PIP5K1CO60331 668 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 HLA-DPB1P04440 258 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 TGM1P22735 817 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 LTBRP36941 435 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 SYT14P1Q58G82 188 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 PIGGQ5H8A4 983 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 ENTPD8Q5MY95 495 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 ASB17Q8WXJ9 295 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 MS4A6EQ96DS6 147 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 KCTD7Q96MP8 289 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 C1RLQ9NZP8 487 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 NLKQ9UBE8 527 aa8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 PRRC2BQ5JSZ5 2229 aaKnown RBP8.37□□□□□ -1.07
LIMCH1-202ENST00000381753 ZNF593O00488 134 aaPredicted RBP8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 GUSBP08236 651 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ADRA2AP08913 450 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 VDAC1P21796 283 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 AQP2P41181 271 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 LGALS7P47929 136 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ZNF628Q5EBL2 1059 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 OR6F1Q8NGZ6 308 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 C16orf52Q8NHV5 167 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 NT5C3BQ969T7 300 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 MAN2C1Q9NTJ4 1040 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 MYH10P35580 1976 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 BCORQ6W2J9 1755 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 IGLV3-10A0A075B6K4 115 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 M0R082 166 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 WISP1O95388 367 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 SRD5A1P18405 259 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 FCARP24071 287 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 TEAD1P28347 426 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 S100A2P29034 98 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 PAFAH1B2P68402 229 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 MAP4K2Q12851 820 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 Q56UQ5 140 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 HACD4Q5VWC8 232 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 TMEM80Q96HE8 168 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ZNF416Q9BWM5 594 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 SLCO1B3Q9NPD5 702 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ZNF69Q9UC07 566 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 IGHV4-34P06331 123 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ADRB1P08588 477 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 POU3F3P20264 500 aaPredicted RBP8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 SEMA6DQ8NFY4 1073 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 MAL2Q969L2 176 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 LAT2Q9GZY6 243 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 NDUFAF4Q9P032 175 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ALG5Q9Y673 324 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 CNTRLQ7Z7A1 2325 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 TNS1Q9HBL0 1735 aaKnown RBP8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 A0A1W2PQF6 199 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 AHCYL1O43865 530 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ORC5O43913 435 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 SSX2Q16385 188 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 THAP6Q8TBB0 222 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 LKAAEAR1Q8TD35 194 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 CMSS1Q9BQ75 279 aaKnown RBP8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 HHLA2Q9UM44 414 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 CSF3P09919 207 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 CD1EP15812 388 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ECI1P42126 302 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 AKR1C1Q04828 323 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ADPRMQ3LIE5 342 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 SFRP4Q6FHJ7 346 aaPredicted RBP8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 SIGLEC10Q96LC7 697 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 OR52B2Q96RD2 323 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ANKRA2Q9H9E1 313 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 ZNF286AQ9HBT8 521 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 SIRT5Q9NXA8 310 aa8.36□□□□□ -1.07
LIMCH1-202ENST00000381753 OR6C6A6NF89 314 aa8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 EEDO75530 441 aaKnown RBP8.35□□□□□ -1.07
LIMCH1-202ENST00000381753 APOL3O95236 402 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms