RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 FZD7O75084 574 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 HTR2AP28223 471 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 LSP1P33241 339 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 MTNR1AP48039 350 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 GIPRP48546 466 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 TSTQ16762 297 aaKnown RBP13.44□□□□□ -0.26
DDX55-202ENST00000354291 RUNDC3AQ59EK9 446 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 RGS7BPQ6MZT1 257 aaPredicted RBP13.44□□□□□ -0.26
DDX55-202ENST00000354291 DLEU7Q6UYE1 221 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 H1FNTQ75WM6 255 aaPredicted RBP13.44□□□□□ -0.26
DDX55-202ENST00000354291 ARMC8Q8IUR7 673 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 OR6S1Q8NH40 331 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 CCL17Q92583 94 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 MAGEB18Q96M61 343 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 ZNF75AQ96N20 296 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 EPYCQ99645 322 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 IKZF5Q9H5V7 419 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 TNFRSF19Q9NS68 423 aa13.44□□□□□ -0.26
DDX55-202ENST00000354291 PURGQ9UJV8 347 aaKnown RBP13.44□□□□□ -0.26
DDX55-202ENST00000354291 A0A087WUJ7 227 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 AKAP8O43823 692 aaKnown RBP13.43□□□□□ -0.26
DDX55-202ENST00000354291 FOXH1O75593 365 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 RAB36O95755 333 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 CRYBA1P05813 215 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 GRPRP30550 384 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 RGS8P57771 180 aaPredicted RBP13.43□□□□□ -0.26
DDX55-202ENST00000354291 RAB1AP62820 205 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 RBBP4Q09028 425 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 ZNF154Q13106 437 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 RAB39AQ14964 217 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 PHYHD1Q5SRE7 291 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 CARD17Q5XLA6 110 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 OLFML2AQ68BL7 652 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 ASPHD2Q6ICH7 369 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 ZNF813Q6ZN06 617 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 RANBP3LQ86VV4 465 aaPredicted RBP13.43□□□□□ -0.26
DDX55-202ENST00000354291 DPP10Q8N608 796 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 PIK3C3Q8NEB9 887 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 FAM110DQ8TAY7 271 aaPredicted RBP13.43□□□□□ -0.26
DDX55-202ENST00000354291 TSPEARQ8WU66 669 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 OR51B6Q9H340 312 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 VIPAS39Q9H9C1 493 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 ARGLU1Q9NWB6 273 aaPredicted RBP13.43□□□□□ -0.26
DDX55-202ENST00000354291 ANGPT4Q9Y264 503 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 NDUFAF1Q9Y375 327 aa13.43□□□□□ -0.26
DDX55-202ENST00000354291 PPIAL4EA0A075B759 164 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 PPIAL4CA0A0B4J2A2 164 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 PPIAL4DF5H284 164 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 M0R082 166 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 ANGPT2O15123 496 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 TRAF3IP2O43734 574 aaPredicted RBP13.42□□□□□ -0.26
DDX55-202ENST00000354291 MFN2O95140 757 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 FAM157BP0CG42 384 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 PPIAL4FP0DN26 164 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 AQP1P29972 269 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 RAG2P55895 527 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 KLF3P57682 345 aaPredicted RBP13.42□□□□□ -0.26
DDX55-202ENST00000354291 OR1Q1Q15612 314 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 ZNF362Q5T0B9 420 aaPredicted RBP13.42□□□□□ -0.26
DDX55-202ENST00000354291 SWT1Q5T5J6 900 aaKnown RBP13.42□□□□□ -0.26
DDX55-202ENST00000354291 COMTD1Q86VU5 262 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 C11orf65Q8NCR3 313 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 ADPRHL1Q8NDY3 354 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 ZNF417Q8TAU3 575 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 SYNPRQ8TBG9 265 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 GTF3AQ92664 365 aaKnown RBP13.42□□□□□ -0.26
DDX55-202ENST00000354291 ZNF587Q96SQ5 575 aaPredicted RBP13.42□□□□□ -0.26
DDX55-202ENST00000354291 CPPED1Q9BRF8 314 aaPredicted RBP13.42□□□□□ -0.26
DDX55-202ENST00000354291 SIKE1Q9BRV8 207 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 MRI1Q9BV20 369 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 SAP30LQ9HAJ7 183 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.42□□□□□ -0.26
DDX55-202ENST00000354291 NKIRAS2Q9NYR9 191 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 B3GAT1Q9P2W7 334 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 SEC14L4Q9UDX3 406 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 SLC7A8Q9UHI5 535 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 POFUT2Q9Y2G5 429 aa13.42□□□□□ -0.26
DDX55-202ENST00000354291 IGKV1D-42A0A075B6H8 117 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 A0A0B4J2E0 115 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 A0A1B0GX12 115 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 TRAPPC2LH3BP13 241 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 NQO1P15559 274 aaKnown RBP13.41□□□□□ -0.26
DDX55-202ENST00000354291 KRTAP10-3P60369 221 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 CYP51A1Q16850 503 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 METTL21CQ5VZV1 264 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 DHDDSQ86SQ9 333 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 SLC30A8Q8IWU4 369 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 UEVLDQ8IX04 471 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 SCAIQ8N9R8 606 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 OR52E2Q8NGJ4 325 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 SLC41A3Q96GZ6 507 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 OR2M2Q96R28 347 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 CGREF1Q99674 301 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 ASPNQ9BXN1 380 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 SLCO1C1Q9NYB5 712 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 KLHL14Q9P2G3 628 aa13.41□□□□□ -0.26
DDX55-202ENST00000354291 MDFIC2A0A1B0GVS7 189 aa13.4□□□□□ -0.26
DDX55-202ENST00000354291 SLC22A23A1A5C7 686 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 358.6 ms