RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ZBTB8BQ8NAP8 495 aaPredicted RBP16.44■□□□□ 0.22
USP39-201ENST00000323701 ADPRHL1Q8NDY3 354 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 GHSRQ92847 366 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 MRPL13Q9BYD1 178 aaKnown RBP16.44■□□□□ 0.22
USP39-201ENST00000323701 AKIP1Q9NQ31 210 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 CCDC59Q9P031 241 aaKnown RBP16.44■□□□□ 0.22
USP39-201ENST00000323701 ZNF593O00488 134 aaPredicted RBP16.43■□□□□ 0.22
USP39-201ENST00000323701 BMP4P12644 408 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 ALOX5APP20292 161 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 ENPP1P22413 925 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 CD97P48960 835 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 SUCLG1P53597 346 aaKnown RBP16.43■□□□□ 0.22
USP39-201ENST00000323701 NANOS3P60323 173 aaKnown RBP16.43■□□□□ 0.22
USP39-201ENST00000323701 ACTA2P62736 377 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 ACTG2P63267 376 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 SIRPAP78324 504 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 SLC35A1P78382 337 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 GGNQ86UU5 652 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 CENPSQ8N2Z9 138 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 ADAD1Q96M93 576 aaKnown RBP16.43■□□□□ 0.22
USP39-201ENST00000323701 KCNS3Q9BQ31 491 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 C6orf62Q9GZU0 229 aaPredicted RBP16.43■□□□□ 0.22
USP39-201ENST00000323701 ZNF407Q9C0G0 2248 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 A0A1B0GTH9 108 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 ABHD16AO95870 558 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 GPR50Q13585 617 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 ZNF239Q16600 458 aaKnown RBP16.43■□□□□ 0.22
USP39-201ENST00000323701 UBQLNLQ8IYU4 475 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 MFSD4AQ8N468 514 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 KCTD7Q96MP8 289 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 RYDENQ9NUL5 291 aaKnown RBP16.43■□□□□ 0.22
USP39-201ENST00000323701 CSAG2Q9Y5P2 127 aa16.43■□□□□ 0.22
USP39-201ENST00000323701 A6NIZ1 184 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 OGG1O15527 345 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 SEC14L5O43304 696 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 SULT1C4O75897 302 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 HLA-DPB1P04440 258 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 FKBP2P26885 142 aaKnown RBP16.42■□□□□ 0.22
USP39-201ENST00000323701 PTGS2P35354 604 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 CASRP41180 1078 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 RAP1BP61224 184 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 RAP1AP62834 184 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 CBX3Q13185 183 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 MFAP5Q13361 173 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 CDK5R1Q15078 307 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 CARD17Q5XLA6 110 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 OTOSQ8NHW6 89 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 NSMAFQ92636 917 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 HTRA1Q92743 480 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 COX4I2Q96KJ9 171 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 KLHL15Q96M94 604 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 OXGR1Q96P68 337 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 PDCD1LG2Q9BQ51 273 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 FAM173AQ9BQD7 235 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 ZNF703Q9H7S9 590 aaPredicted RBP16.42■□□□□ 0.22
USP39-201ENST00000323701 PALMDQ9NP74 551 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 LAMP5Q9UJQ1 280 aa16.42■□□□□ 0.22
USP39-201ENST00000323701 UPK3AO75631 287 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 RPP14O95059 124 aaKnown RBP16.41■□□□□ 0.22
USP39-201ENST00000323701 PGA4P0DJD7 388 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 PGA3P0DJD8 388 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 ZNF12P17014 697 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 MDS2Q8NDY4 140 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 THEM6Q8WUY1 208 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 PHF3Q92576 2039 aaKnown RBP16.41■□□□□ 0.22
USP39-201ENST00000323701 FAM166BA8MTA8 275 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 CTDSP2O14595 271 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 NCR1O76036 304 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 GFRA1P56159 465 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 RPS11P62280 158 aaKnown RBP eCLIP16.41■□□□□ 0.22
USP39-201ENST00000323701 LIPNQ5VXI9 398 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 GALNTL5Q7Z4T8 443 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 NR2C2APQ86WQ0 139 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 SLC26A10Q8NG04 563 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 ABHD4Q8TB40 342 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 CHPT1Q8WUD6 406 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 SFXN2Q96NB2 322 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 OR2B2Q9GZK3 357 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 MMP27Q9H306 513 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 ZNF552Q9H707 407 aaPredicted RBP16.41■□□□□ 0.22
USP39-201ENST00000323701 SLCO1C1Q9NYB5 712 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 ABI3Q9P2A4 366 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 KIAA1549Q9HCM3 1950 aa16.41■□□□□ 0.22
USP39-201ENST00000323701 DNAJC13O75165 2243 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 EIF1AYO14602 144 aaKnown RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 SPARCP09486 303 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 ZNF43P17038 809 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 CRABP1P29762 137 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 GBX2P52951 348 aaPredicted RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 ADAM8P78325 824 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 CLN3Q13286 438 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 AGAP7PQ5VUJ5 663 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 SPATC1Q76KD6 591 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 SNX29P2Q8IUI4 249 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 SLC25A46Q96AG3 418 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 AGAP4Q96P64 663 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 ZNF385AQ96PM9 386 aaKnown RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 TTTY12Q9BZ98 90 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 BOKQ9UMX3 212 aaPredicted RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 SC5DO75845 299 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms