RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 KLK1P06870 262 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GP1BAP07359 652 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 LINC00614P0C842 121 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 TAS2R60P59551 318 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 DSC1Q08554 894 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 ECH1Q13011 328 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 HES3Q5TGS1 186 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 C6orf201Q7Z4U5 140 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 CLEC1AQ8NC01 280 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 OR8G5Q8NG78 346 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 MAP1LC3BQ9GZQ8 125 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GABARAPL1Q9H0R8 117 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF391Q9UJN7 358 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 FZD10Q9ULW2 581 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SOX21Q9Y651 276 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 FAM183AA6NL82 134 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 LEFTY2O00292 366 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 MFNGO00587 321 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 HSD17B6O14756 317 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 DBHP09172 617 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 CSNK1G2P78368 415 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 THEM4Q5T1C6 240 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 MEX3BQ6ZN04 569 aaKnown RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 MEPCEQ7L2J0 689 aaKnown RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 FBXL6Q8N531 539 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 OR10D4PQ8NGN7 298 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 PHOSPHO2Q8TCD6 241 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 TMEM38AQ9H6F2 299 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 LOC105369274A0A096LPK9 316 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 RRP8O43159 456 aaKnown RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 CA3P07451 260 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 EDNRBP24530 442 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 CSKP41240 450 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GPM6AP51674 278 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SERF2P84101 59 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 LRRC32Q14392 662 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SLBPQ14493 270 aaKnown RBP eCLIP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SLC35E3Q7Z769 313 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 NRSN1Q8IZ57 195 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 OR4N4Q8N0Y3 316 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GPR150Q8NGU9 434 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 FOXJ1Q92949 421 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 TMEM125Q96AQ2 219 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 ABHD6Q9BV23 337 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 DUSP21Q9H596 190 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GBA2Q9HCG7 927 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 ELOVL2Q9NXB9 296 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 B3GAT1Q9P2W7 334 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 NENFQ9UMX5 172 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 MAFBQ9Y5Q3 323 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 TNS2Q63HR2 1409 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 A0A0B4J2A0 478 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 DBX1A6NMT0 343 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 ISLRO14498 428 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SDHDO14521 159 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 XRCC3O43542 346 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 LDB2O43679 373 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GCH1P30793 250 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 CASP9P55211 416 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 JOSD1Q15040 202 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SHHQ15465 462 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 CATSPERDQ86XM0 798 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 OR4C16Q8NGL9 310 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 HMGB4Q8WW32 186 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GPA33Q99795 319 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SLC46A2Q9BY10 475 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF768Q9H5H4 540 aaKnown RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 DIP2BQ9P265 1576 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SHPKQ9UHJ6 478 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 TMEM131LA2VDJ0 1609 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 OR2M5A3KFT3 312 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GAGE10A6NGK3 116 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GPR171O14626 319 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SLC25A6P12236 298 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 DOC2BQ14184 412 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 ERFEQ4G0M1 354 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 DNAJC5GQ8N7S2 189 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 REEP6Q96HR9 211 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GPR88Q9GZN0 384 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 NAA50Q9GZZ1 169 aaKnown RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 SMOC2Q9H3U7 446 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 RCE1Q9Y256 329 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 TRAPPC1Q9Y5R8 145 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 RICTORQ6R327 1708 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 TRAPPC2LH3BP13 241 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 GSTP1P09211 210 aaKnown RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 MGST1P10620 155 aaKnown RBP4.49□□□□□ -1.69
CSMD3-201ENST00000297405 FAM3AP98173 230 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 RING1Q06587 406 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 FZD2Q14332 565 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 UBE2V2Q15819 145 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 KHDC3LQ587J8 217 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 OR5AU1Q8NGC0 362 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 PXYLP1Q8TE99 480 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 STACQ99469 402 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 WASHC3Q9Y3C0 194 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 PCDHGC4Q9Y5F7 938 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 URGCP-MRPS24S4R325 110 aa4.49□□□□□ -1.69
CSMD3-201ENST00000297405 A0A0U1RQK1 487 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms