RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 MAGEE2Q8TD90 523 aaPredicted RBP16.42■□□□□ 0.22
PNKP-224ENST00000631020 EME1Q96AY2 570 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 SLC25A44Q96H78 314 aaPredicted RBP16.42■□□□□ 0.22
PNKP-224ENST00000631020 ADAD1Q96M93 576 aaKnown RBP16.42■□□□□ 0.22
PNKP-224ENST00000631020 RBM4BQ9BQ04 359 aaKnown RBP16.42■□□□□ 0.22
PNKP-224ENST00000631020 C9orf16Q9BUW7 83 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 RBM4Q9BWF3 364 aaKnown RBP16.42■□□□□ 0.22
PNKP-224ENST00000631020 SLCO5A1Q9H2Y9 848 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 KRT84Q9NSB2 600 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 USE1Q9NZ43 259 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 MED13LQ71F56 2210 aa16.42■□□□□ 0.22
PNKP-224ENST00000631020 IGFBP5P24593 272 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 POU1F1P28069 291 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 EPHA2P29317 976 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 ACVR1BP36896 505 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 FOXG1P55316 489 aaPredicted RBP16.41■□□□□ 0.22
PNKP-224ENST00000631020 LRRC36Q1X8D7 754 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 ZBTB49Q6ZSB9 765 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 LINGO2Q7L985 606 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 HDAC2Q92769 488 aaKnown RBP16.41■□□□□ 0.22
PNKP-224ENST00000631020 RASD2Q96D21 266 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 ERMAPQ96PL5 475 aaPredicted RBP16.41■□□□□ 0.22
PNKP-224ENST00000631020 FOXC2Q99958 501 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 MRPL13Q9BYD1 178 aaKnown RBP16.41■□□□□ 0.22
PNKP-224ENST00000631020 CXXC4Q9H2H0 198 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 TBC1D23Q9NUY8 699 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 GRHPRQ9UBQ7 328 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 NDRG3Q9UGV2 375 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 ST6GALNAC2Q9UJ37 374 aa16.41■□□□□ 0.22
PNKP-224ENST00000631020 TEX13CA0A0J9YWL9 993 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 SH3D21A4FU49 640 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 H3BN98 237 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 CASQ2O14958 399 aaPredicted RBP16.4■□□□□ 0.22
PNKP-224ENST00000631020 ARPC3O15145 178 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 SLC43A1O75387 559 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 TRMUO75648 421 aaKnown RBP16.4■□□□□ 0.22
PNKP-224ENST00000631020 TXNDC12O95881 172 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 PGA4P0DJD7 388 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 PGA3P0DJD8 388 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 APEHP13798 732 aaKnown RBP16.4■□□□□ 0.22
PNKP-224ENST00000631020 PEX2P28328 305 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 POLR2IP36954 125 aaKnown RBP16.4■□□□□ 0.22
PNKP-224ENST00000631020 ALDH3A2P51648 485 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 MESTQ5EB52 335 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 ZNF362Q5T0B9 420 aaPredicted RBP16.4■□□□□ 0.22
PNKP-224ENST00000631020 FBXW9Q5XUX1 488 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 C20orf196Q8IYI0 205 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 GABRG1Q8N1C3 465 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 IQCF1Q8N6M8 205 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 OR52L1Q8NGH7 329 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 NRG4Q8WWG1 115 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 NRGNQ92686 78 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 NR1H4Q96RI1 486 aaPredicted RBP16.4■□□□□ 0.22
PNKP-224ENST00000631020 NDEL1Q9GZM8 345 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 ELOVL5Q9NYP7 299 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 ITPR3Q14573 2671 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 AKAP8O43823 692 aaKnown RBP16.4■□□□□ 0.22
PNKP-224ENST00000631020 SDHAP31040 664 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 GIPRP48546 466 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 RPS6KA3P51812 740 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 ART1P52961 327 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 CRISP1P54107 249 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 CDK5Q00535 292 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 HIST3H3Q16695 136 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 SLC35F1Q5T1Q4 408 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 TMEM236Q5W0B7 351 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 GPR139Q6DWJ6 353 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 ACSM5Q6NUN0 579 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 UBE2J2Q8N2K1 259 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 LNX2Q8N448 690 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 SYT14Q8NB59 555 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 TEX47Q8TBZ9 253 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 TMEM54Q969K7 222 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 ZNF566Q969W8 418 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 ZNF837Q96EG3 531 aaPredicted RBP16.4■□□□□ 0.22
PNKP-224ENST00000631020 LRR1Q96L50 414 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 KCNK17Q96T54 332 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 LINC00470Q9BZP3 86 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 MALT1Q9UDY8 824 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 SCOCQ9UIL1 159 aa16.4■□□□□ 0.22
PNKP-224ENST00000631020 MAGEA13PA6NCF6 341 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 M0R3G1 203 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 IMPA2O14732 288 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 ARHGEF9O43307 516 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 IDH3BO43837 385 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 CNOT4O95628 575 aaKnown RBP16.39■□□□□ 0.21
PNKP-224ENST00000631020 HIST1H1CP16403 213 aaKnown RBP16.39■□□□□ 0.21
PNKP-224ENST00000631020 CD79BP40259 229 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 CDKN2AP42771 156 aaKnown RBP16.39■□□□□ 0.21
PNKP-224ENST00000631020 ESRRGP62508 458 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 FAPQ12884 760 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 GINS1Q14691 196 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 OGFRL1Q5TC84 451 aaPredicted RBP16.39■□□□□ 0.21
PNKP-224ENST00000631020 LRFN4Q6PJG9 635 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 Q6ZT83 130 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 BEND4Q6ZU67 534 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 PTCHD4Q6ZW05 846 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 POMGNT2Q8NAT1 580 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 OR2T33Q8NG76 320 aa16.39■□□□□ 0.21
PNKP-224ENST00000631020 NMD3Q96D46 503 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms