RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 NBPF19A0A087WUL8 3843 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 H0YGG7 62 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 CLDN4O14493 209 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 ADAMDEC1O15204 470 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 NUDT21O43809 227 aaKnown RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 OR10H2O60403 315 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 SDC3O75056 442 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 TNFAIP8O95379 198 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 DUS4LO95620 317 aaKnown RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 AIFM1O95831 613 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 STATHP02808 62 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 BCHEP06276 602 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 NR2F1P10589 423 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 RNH1P13489 461 aaKnown RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 BCKDHBP21953 392 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 FRKP42685 505 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 CCT3P49368 545 aaKnown RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 DUSP3P51452 185 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 GTF2A1P52655 376 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 CRISP3P54108 245 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 RAB38P57729 211 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 SMIM11AP58511 58 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 ARF3P61204 181 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 CDK6Q00534 326 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 FOLH1Q04609 750 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 BIKQ13323 160 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 ZNHIT3Q15649 155 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 DEFB134Q4QY38 66 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 GARNL3Q5VVW2 1013 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 SAXO2Q658L1 398 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 REEP3Q6NUK4 255 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 SLC48A1Q6P1K1 146 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 C16orf62Q7Z3J2 963 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 VN1R4Q7Z5H5 301 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 RNF130Q86XS8 419 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 MARVELD2Q8N4S9 558 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 AMER3Q8N944 861 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 OR5AK3PQ8NH89 298 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 OR5K1Q8NHB7 308 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 SPPL2AQ8TCT8 520 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 RNF128Q8TEB7 428 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 PATE1Q8WXA2 126 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 GEMIN6Q8WXD5 167 aaKnown RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 NAT6Q93015 286 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 SLCO4A1Q96BD0 722 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 TM4SF19Q96DZ7 209 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 CNBD2Q96M20 576 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 TGM7Q96PF1 710 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 MS4A4EQ96PG1 132 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 OR2A5Q96R48 311 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 DOHHQ9BU89 302 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 ZNF717Q9BY31 904 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 SLC7A5P2Q9GIP4 190 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 RAB33BQ9H082 229 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 IKZF5Q9H5V7 419 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 ARMC7Q9H6L4 198 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 REEP1Q9H902 201 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 PRMT8Q9NR22 394 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 ZCCHC3Q9NUD5 404 aaKnown RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 ZNF701Q9NV72 531 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 EXD2Q9NVH0 621 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 DDX18Q9NVP1 670 aaKnown RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 TEX10Q9NXF1 929 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 SMPD3Q9NY59 655 aaPredicted RBP4.19□□□□□ -1.74
VPS29-212ENST00000621131 NLGN3Q9NZ94 848 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 PILRAQ9UKJ1 303 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 PLCL2Q9UPR0 1127 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 LIPT1Q9Y234 373 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 ASB4Q9Y574 426 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 SLC22A7Q9Y694 548 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 AP4B1Q9Y6B7 739 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 GON4LQ3T8J9 2241 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 FBN3Q75N90 2809 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 LRRK2Q5S007 2527 aa4.19□□□□□ -1.74
VPS29-212ENST00000621131 THADAQ6YHU6 1953 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 SDK1Q7Z5N4 2213 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 ABCA7Q8IZY2 2146 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 HYKKA2RU49 373 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 FAM149AA5PLN7 773 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 SLC9B1P1A6NJY1 282 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 G3V2T6 193 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 J3KRW8 73 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 DENRO43583 198 aaKnown RBP4.18□□□□□ -1.74
VPS29-212ENST00000621131 GALR3O60755 368 aaPredicted RBP4.18□□□□□ -1.74
VPS29-212ENST00000621131 AK1P00568 194 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 IFNW1P05000 195 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 IFI6P09912 130 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 PVRP15151 417 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 PORP16435 677 aaPredicted RBP4.18□□□□□ -1.74
VPS29-212ENST00000621131 NT5EP21589 574 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 PTPN6P29350 595 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 RRM2P31350 389 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 CAPGP40121 348 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 GZMMP51124 257 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 ALDH3A2P51648 485 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 XKP51811 444 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 LIM2P55344 173 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 SELENOWP63302 87 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 SPIBQ01892 262 aa4.18□□□□□ -1.74
VPS29-212ENST00000621131 STX4Q12846 297 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms