RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 FAM118AQ9NWS6 357 aa10.86□□□□□ -0.67
TGFB1-204ENST00000600196 MED29Q9NX70 200 aa10.86□□□□□ -0.67
TGFB1-204ENST00000600196 UPB1Q9UBR1 384 aa10.86□□□□□ -0.67
TGFB1-204ENST00000600196 NCOA6Q14686 2063 aaPredicted RBP10.86□□□□□ -0.67
TGFB1-204ENST00000600196 HIVEP3Q5T1R4 2406 aa10.86□□□□□ -0.67
TGFB1-204ENST00000600196 TEX13CA0A0J9YWL9 993 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 LOC100130705A0A1B0GUX0 176 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 SLC22A23A1A5C7 686 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 DLGAP1O14490 977 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 ARHGEF9O43307 516 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 DHHO43323 396 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 KRT33AO76009 404 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 SOX14O95416 240 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 CLDN14O95500 239 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 PPP1R3DO95685 299 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 COX5AP20674 150 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 POU1F1P28069 291 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 SELENOPP49908 381 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 ZNF84P51523 738 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 SNRPGP62308 76 aaKnown RBP10.85□□□□□ -0.67
TGFB1-204ENST00000600196 SORDQ00796 357 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 LGALS3BPQ08380 585 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 MESTQ5EB52 335 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 ACSM5Q6NUN0 579 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 VWA1Q6PCB0 445 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 FOXL2NBQ6ZUU3 175 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 NPEPL1Q8NDH3 523 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 STEAP2Q8NFT2 490 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 OR4Q3Q8NH05 313 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 NRG4Q8WWG1 115 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 HDAC2Q92769 488 aaKnown RBP10.85□□□□□ -0.67
TGFB1-204ENST00000600196 Q96MT0 163 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 MUS81Q96NY9 551 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 NMNAT2Q9BZQ4 307 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 RACGAP1Q9H0H5 632 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 SLC7A10Q9NS82 523 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 TAS2R16Q9NYV7 291 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 SH3BGRL2Q9UJC5 107 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 CLEC4AQ9UMR7 237 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
TGFB1-204ENST00000600196 KLF2Q9Y5W3 355 aaPredicted RBP10.85□□□□□ -0.67
TGFB1-204ENST00000600196 ALPK2Q86TB3 2170 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 INTS1Q8N201 2190 aaKnown RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 ZNF99A8MXY4 864 aaPredicted RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 PRODHO43272 600 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 MITFO75030 526 aaPredicted RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 KHDRBS3O75525 346 aaKnown RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 SNAP29O95721 258 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 HRGP04196 525 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 HIST1H1CP16403 213 aaKnown RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 BMP5P22003 454 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 CAPGP40121 348 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 CD79BP40259 229 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 CDKN2AP42771 156 aaKnown RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 CSNK2BP67870 215 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 ADARB1P78563 741 aaKnown RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 MRPS34P82930 218 aaKnown RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 CAMK2DQ13557 499 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 SNAPC1Q16533 368 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 KCNMB1Q16558 191 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 OCLNQ16625 522 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 LRRC36Q1X8D7 754 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 CLEC12AQ5QGZ9 265 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 SFRP5Q5T4F7 317 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 TSPO2Q5TGU0 170 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 LRFN4Q6PJG9 635 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 SLC25A47Q6Q0C1 308 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 SYT9Q86SS6 491 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 EGFL6Q8IUX8 553 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 GALNT4Q8N4A0 578 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 ZNF610Q8N9Z0 462 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 OR52E2Q8NGJ4 325 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 TMEM163Q8TC26 289 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 ITLN2Q8WWU7 325 aaPredicted RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 TFAP2CQ92754 450 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 RNASE6Q93091 150 aaKnown RBP10.84□□□□□ -0.67
TGFB1-204ENST00000600196 RFKQ969G6 155 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 MCHR2Q969V1 340 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 EMC6Q9BV81 110 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 ULBP2Q9BZM5 246 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 RIBC2Q9H4K1 309 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 KCNG2Q9UJ96 466 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 FBXL3Q9UKT7 428 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 GMPPBQ9Y5P6 360 aa10.84□□□□□ -0.67
TGFB1-204ENST00000600196 PRR23D1E9PI22 279 aaPredicted RBP10.83□□□□□ -0.68
TGFB1-204ENST00000600196 C16orf97H3BN30 126 aa10.83□□□□□ -0.68
TGFB1-204ENST00000600196 QDPRP09417 244 aa10.83□□□□□ -0.68
TGFB1-204ENST00000600196 PRR23D2P0DMB1 279 aaPredicted RBP10.83□□□□□ -0.68
TGFB1-204ENST00000600196 LSM6P62312 80 aaKnown RBP10.83□□□□□ -0.68
TGFB1-204ENST00000600196 SIRPAP78324 504 aa10.83□□□□□ -0.68
TGFB1-204ENST00000600196 GLO1Q04760 184 aa10.83□□□□□ -0.68
TGFB1-204ENST00000600196 TOP3AQ13472 1001 aaPredicted RBP10.83□□□□□ -0.68
TGFB1-204ENST00000600196 NXNL2Q5VZ03 156 aa10.83□□□□□ -0.68
TGFB1-204ENST00000600196 ANKRD34AQ69YU3 496 aa10.83□□□□□ -0.68
TGFB1-204ENST00000600196 LEG1Q6P5S2 330 aa10.83□□□□□ -0.68
TGFB1-204ENST00000600196 ANKRD16Q6P6B7 361 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms