RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 LYPD3O95274 346 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 THY1P04216 161 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 HIST1H2ABP04908 130 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MELKQ14680 651 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 RGS7BPQ6MZT1 257 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 LRFN4Q6PJG9 635 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 RINLQ6ZS11 566 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 HIST3H2AQ7L7L0 130 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 GLCCI1Q86VQ1 547 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 LRRC17Q8N6Y2 441 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 OR4D11Q8NGI4 311 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 CLDND2Q8NHS1 167 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SLC26A7Q8TE54 656 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 HIST1H2ACQ93077 130 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MPP4Q96JB8 637 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SH3GL3Q99963 347 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SLC19A3Q9BZV2 496 aa16.88■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SLC22A23A1A5C7 686 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 VIMP08670 466 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PGA4P0DJD7 388 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PGA3P0DJD8 388 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SAGP10523 405 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 UMPSP11172 480 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 NAT2P11245 290 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 CD247P20963 164 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TMEM33P57088 247 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MRPS11P82912 194 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TMEM53Q6P2H8 277 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 DPPA2Q7Z7J5 298 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 RETREG3Q86VR2 466 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 CARM1Q86X55 608 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SLC30A7Q8NEW0 376 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF385DQ9H6B1 395 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 NARFLQ9H6Q4 476 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 KAT8Q9H7Z6 458 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 RNF121Q9H920 327 aa16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF275Q9NSD4 429 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-204ENST00000536782 BCL10O95999 233 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 IGHG1P01857 330 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TFP02787 698 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 QDPRP09417 244 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ASAH2BP0C7U1 165 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 FAM157BP0CG42 384 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ITGA2P17301 1181 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PCGF2P35227 344 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SELENOVP59797 346 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 NFYCQ13952 458 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 NKPD1Q17RQ9 610 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SLC36A2Q495M3 483 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 INTS11Q5TA45 600 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 NANOGNBQ7Z5D8 188 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 OR4K5Q8NGD3 323 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TSPEARQ8WU66 669 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 YIPF5Q969M3 257 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TAMM41Q96BW9 452 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF426Q9BUY5 554 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 RACGAP1Q9H0H5 632 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PCDHAC1Q9H158 963 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 C1orf198Q9H425 327 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 CDH20Q9HBT6 801 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF446Q9NWS9 450 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 GPR160Q9UJ42 338 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 METRNQ9UJH8 293 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TRIM33Q9UPN9 1127 aa16.86■□□□□ 0.29
TNFRSF1B-204ENST00000536782 BLOC1S5-TXNDC5H3BN57 136 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PPIHO43447 177 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 NCR1O76036 304 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PTHP01270 115 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 CCL2P13500 99 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 CLRN1P58418 232 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ALKBH6Q3KRA9 238 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SLC16A14Q7RTX9 510 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TSPYL5Q86VY4 417 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 OR10A6Q8NH74 314 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 RASSF5Q8WWW0 418 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TMEM186Q96B77 213 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 THOC1Q96FV9 657 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SIKE1Q9BRV8 207 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF416Q9BWM5 594 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 HIF1ANQ9NWT6 349 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TAAR3PQ9P1P4 343 aa16.85■□□□□ 0.29
TNFRSF1B-204ENST00000536782 FAM157AC9JC47 383 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 CLPTM1O96005 669 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MSMBP08118 114 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 ZNF84P51523 738 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 KLF3P57682 345 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PLP2Q04941 152 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 TBC1D28Q2M2D7 210 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 NRN1LQ496H8 165 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PAQR4Q8N4S7 273 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 OR1J2Q8NGS2 313 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SYNPRQ8TBG9 265 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 SNX33Q8WV41 574 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MCHR2Q969V1 340 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 PRSS27Q9BQR3 290 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 LRMDAQ9H2I8 198 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 OR51B6Q9H340 312 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 LPAR2Q9HBW0 351 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 MEPEQ9NQ76 525 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms