RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TBC1D15Q8TC07 691 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 AP3S1Q92572 193 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 THRSPQ92748 146 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 HAS2Q92819 552 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 RPL3LQ92901 407 aaKnown RBP9.21□□□□□ -0.94
HDAC3-214ENST00000495485 NTNG2Q96CW9 530 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 ABHD17AQ96GS6 310 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 ADAD1Q96M93 576 aaKnown RBP9.21□□□□□ -0.94
HDAC3-214ENST00000495485 OXGR1Q96P68 337 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 INTS14Q96SY0 518 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 TBX5Q99593 518 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 FAM173AQ9BQD7 235 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 NUAK2Q9H093 628 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 PALMDQ9NP74 551 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 TIGARQ9NQ88 270 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 LRFN1Q9P244 771 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 LAMP5Q9UJQ1 280 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 FBXL2Q9UKC9 423 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 RASD1Q9Y272 281 aa9.21□□□□□ -0.94
HDAC3-214ENST00000495485 LOC102725191A0A1B0GVB3 256 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 A0A1W2PQL4 384 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF726A6NNF4 738 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 MS4A18H0YCH9 400 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 GPRIN2O60269 458 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 KHDRBS3O75525 346 aaKnown RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 RGS9O75916 674 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 KRT8P05787 483 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 CLUP10909 449 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF43P17038 809 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 CFL1P23528 166 aaKnown RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 GUCA1AP43080 201 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 CRYBB2P43320 205 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 HSF1Q00613 529 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 EGR3Q06889 387 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF239Q16600 458 aaKnown RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 MS4A18Q3C1V0 323 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 GXYLT1Q4G148 440 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 CDONQ4KMG0 1287 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 MESTQ5EB52 335 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 THEM4Q5T1C6 240 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 C1QL3Q5VWW1 255 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 RPUSD3Q6P087 351 aaKnown RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 RPL22L1Q6P5R6 122 aaKnown RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 KCTD18Q6PI47 426 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 CD200R1LQ6Q8B3 271 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 TMPPEQ6ZT21 453 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ASB18Q6ZVZ8 466 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZBTB46Q86UZ6 589 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 BEST3Q8N1M1 668 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF454Q8N9F8 522 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 TEX19Q8NA77 164 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF485Q8NCK3 441 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 OR14L1PQ8NHC6 308 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF519Q8TB69 540 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 POC1BQ8TC44 478 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 SLC39A7Q92504 469 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 PSMF1Q92530 271 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 PHYHIPQ92561 330 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 PNPLA2Q96AD5 504 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 MIB2Q96AX9 1013 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF524Q96C55 264 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ARL5BQ96KC2 179 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 C4orf36Q96KX1 117 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 CEP19Q96LK0 163 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 DACH2Q96NX9 599 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 CENPOQ9BU64 300 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 WDR76Q9H967 626 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 MARCH7Q9H992 704 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 TXNL4BQ9NX01 149 aaKnown RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 KLF13Q9Y2Y9 288 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-214ENST00000495485 ZGRF1Q86YA3 2104 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 DNAJC13O75165 2243 aa9.2□□□□□ -0.94
HDAC3-214ENST00000495485 PCSK5Q92824 1860 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 A0A075B6Q4 140 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 TRAV17A0A0B4J275 112 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 METTL15A6NJ78 407 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 KLRC4-KLRK1H3BQV0 150 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 SLC16A7O60669 478 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 GPX5O75715 221 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 GATBO75879 557 aaKnown RBP9.19□□□□□ -0.94
HDAC3-214ENST00000495485 SULT1C4O75897 302 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF432O94892 652 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 PLGP00747 810 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-214ENST00000495485 IGHG1P01857 330 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 ADRA2AP08913 450 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 FAM87AP0C7U9 286 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 IMPDH2P12268 514 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF823P16415 610 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 MYL9P24844 172 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 PYCR1P32322 319 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 NAA10P41227 235 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-214ENST00000495485 TGM4P49221 684 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 RPS3AP61247 264 aaKnown RBP9.19□□□□□ -0.94
HDAC3-214ENST00000495485 SIRPAP78324 504 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 POU3F1Q03052 451 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF85Q03923 595 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 Q0VFX4 171 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 MZT2AQ6P582 158 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 C16orf87Q6PH81 154 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 TPRA1Q86W33 373 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms