RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 MAKP20794 623 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 CBLP22681 906 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 HTR2AP28223 471 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 IL12AP29459 219 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 LSP1P33241 339 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 S100A3P33764 101 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ATP4BP51164 291 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 CRISP3P54108 245 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SELENOVP59797 346 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SRSF4Q08170 494 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 PUDPQ08623 228 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 RBBP4Q09028 425 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 CAMK2DQ13557 499 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC9A3R2Q15599 337 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 HFEQ30201 348 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 MS4A18Q3C1V0 323 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ARMCX4Q5H9R4 360 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 RPS26P11Q5JNZ5 115 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 TMEM255AQ5JRV8 349 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 FAM209AQ5JX71 171 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 C5orf46Q6UWT4 87 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 WDR88Q6ZMY6 472 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF621Q6ZSS3 439 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SNX32Q86XE0 403 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SKA3Q8IX90 412 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF781Q8N8C0 355 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SCAIQ8N9R8 606 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 GLB1L3Q8NCI6 653 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC30A7Q8NEW0 376 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF519Q8TB69 540 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC38A5Q8WUX1 472 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 UBLCP1Q8WVY7 318 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 WFDC12Q8WWY7 111 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 RAB1CQ92928 201 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC38A4Q969I6 547 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC35B4Q969S0 331 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 TRIM44Q96DX7 344 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 ELMOD3Q96FG2 381 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC41A3Q96GZ6 507 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 TXNDC15Q96J42 360 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 GPA33Q99795 319 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 PKP2Q99959 881 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SPATA9Q9BWV2 254 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 RSPO3Q9BXY4 272 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 OR51B6Q9H340 312 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 C12orf10Q9HB07 376 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 B3GAT2Q9NPZ5 323 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 TCF7L2Q9NQB0 619 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 MMP26Q9NRE1 261 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC6A13Q9NSD5 602 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 DECR2Q9NUI1 292 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 UBAP1Q9NZ09 502 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 CALML5Q9NZT1 146 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 PDP1Q9P0J1 537 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 GPR160Q9UJ42 338 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 LEF1Q9UJU2 399 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 PURGQ9UJV8 347 aaKnown RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 POLR3KQ9Y2Y1 108 aaPredicted RBP4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 MMP24Q9Y5R2 645 aa4.34□□□□□ -1.71
SNRNP40-204ENST00000474025 A0A1B0GWA3 101 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ISPDA4D126 451 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ZSCAN5BA6NJL1 495 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 TRAPPC2LH3BP13 241 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 RFXANKO14593 260 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 TM9SF1O15321 606 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ITM2AO43736 263 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 SPAG7O75391 227 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 FOXH1O75593 365 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 UBOX5O94941 541 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 KRT75O95678 551 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 IGHV1-46P01743 117 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 IGHV3-13P01766 116 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 IGHV2-70P01814 119 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 IGHMP01871 453 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 BGLAPP02818 100 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 LCKP06239 509 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 OR8G3PP0DMU2 310 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 IGHV4-38-2P0DP08 117 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 NQO1P15559 274 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF12P17014 697 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 CSNK1A1P48729 337 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF81P51508 661 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 MMP15P51511 669 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 UCP2P55851 309 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 NME5P56597 212 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 DSTNP60981 165 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 UFM1P61960 85 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 GLO1Q04760 184 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 LRRC74AQ0VAA2 488 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF154Q13106 437 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 HNRNPA0Q13151 305 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 PMS2P3Q13401 168 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 TSTQ16762 297 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 ALG10BQ5I7T1 473 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 OGFOD2Q6N063 350 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 C9orf139Q6ZV77 190 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 SPATC1Q76KD6 591 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 RHOUQ7L0Q8 258 aa4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 PIWIL3Q7Z3Z3 882 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-204ENST00000474025 NET1Q7Z628 596 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms