RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 FCGR1AP12314 374 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 FASP25445 335 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SDC4P31431 198 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 GRIA3P42263 894 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 GSSP48637 474 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 KRT6CP48668 564 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 PPOXP50336 477 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CRADDP78560 199 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CRYZQ08257 329 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 RCAN2Q14206 197 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF273Q14593 569 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SLC9A3R2Q15599 337 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 RPE65Q16518 533 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SYT16Q17RD7 645 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 ARL13AQ5H913 290 aaPredicted RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SPANXN3Q5MJ09 141 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 METRNLQ641Q3 311 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 WDR88Q6ZMY6 472 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 KCTD8Q6ZWB6 473 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 NDUFA11Q86Y39 141 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SELENOHQ8IZQ5 122 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CLEC4FQ8N1N0 589 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CERS2Q96G23 380 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 C5orf30Q96GV9 206 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 TIMD4Q96H15 378 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 RCHY1Q96PM5 261 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF347Q96SE7 839 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CSF3RQ99062 836 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 RBBP8Q99708 897 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 YTHDF1Q9BYJ9 559 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 DHX35Q9H5Z1 703 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 KLHL28Q9NXS3 571 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 OR12D3Q9UGF7 316 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SLC23A2Q9UGH3 650 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 WARS2Q9UGM6 360 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 PPIEQ9UNP9 301 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 MOKQ9UQ07 419 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 MAB21L2Q9Y586 359 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 PUS1Q9Y606 427 aaKnown RBP eCLIP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 KCNE2Q9Y6J6 123 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 COLEC10Q9Y6Z7 277 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 TCRBV3S1A0A5B6 114 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 DHRS12A0PJE2 317 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 HELTA6NFD8 242 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 PCP4L1A6NKN8 68 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SUPT3HB4E1H0 165 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 E7ENX8 843 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 G3V2L1 256 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 MRASO14807 208 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 EMC8O43402 210 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 HS6ST1O60243 411 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 GPC4O75487 556 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CCNB2O95067 398 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 NSA2O95478 260 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 KRT75O95678 551 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 MT-ND5P03915 603 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 KRT8P05787 483 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 GNAO1P09471 354 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 COX5BP10606 129 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 ST6GAL1P15907 406 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SRMP19623 302 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SERPINB1P30740 379 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 IFNA8P32881 189 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 GRIA1P42261 906 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 HNRNPFP52597 415 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SLC35A2P78381 396 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 FASTKQ14296 549 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 OXA1LQ15070 435 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SLC25A52Q3SY17 297 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 DEFB121Q5J5C9 76 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CCNYL2Q5T2Q4 361 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 GDPGP1Q6ZNW5 385 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SHISA6Q6ZSJ9 500 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 RFLNAQ6ZTI6 216 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 RNF144BQ7Z419 303 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CPEB2Q7Z5Q1 589 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 IGFN1Q86VF2 1251 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 FBXL14Q8N1E6 418 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 GPR137CQ8N3F9 429 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 DHRSXQ8N5I4 330 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 PQLC3Q8N755 202 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 SRFBP1Q8NEF9 429 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 S100ZQ8WXG8 99 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 HSD17B8Q92506 261 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 RGMAQ96B86 450 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 DUS3LQ96G46 650 aaKnown RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CENPNQ96H22 339 aaPredicted RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 FAR2Q96K12 515 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 QKIQ96PU8 341 aaKnown RBP eCLIP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 PEBP4Q96S96 227 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 MROQ9BYG7 248 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 TTTY12Q9BZ98 90 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 PRRG3Q9BZD7 231 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 IL22Q9GZX6 179 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 HDHD2Q9H0R4 259 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 OR2AG1Q9H205 316 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 ZNF385DQ9H6B1 395 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 CLEC5AQ9NY25 188 aa3.2□□□□□ -1.9
CNGA1-203ENST00000420489 VSX1Q9NZR4 365 aaPredicted RBP3.2□□□□□ -1.9
CNGA1-203ENST00000420489 ENOPH1Q9UHY7 261 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms