RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ATG16L2Q8NAA4 619 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 MAGEE2Q8TD90 523 aaPredicted RBP16.85■□□□□ 0.29
HOXA9-202ENST00000396345 MCHR2Q969V1 340 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 RASD2Q96D21 266 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 MUCL1Q96DR8 90 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 ERMAPQ96PL5 475 aaPredicted RBP16.85■□□□□ 0.29
HOXA9-202ENST00000396345 SEMA6AQ9H2E6 1030 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 IL20Q9NYY1 176 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 TEX13CA0A0J9YWL9 993 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 G3V2T6 193 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 IMPA2O14732 288 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 TXNDC12O95881 172 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 IGFBP1P08833 259 aaPredicted RBP16.84■□□□□ 0.29
HOXA9-202ENST00000396345 APEHP13798 732 aaKnown RBP16.84■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF23P17027 643 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 HOXC12P31275 282 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 KRR1Q13601 381 aaKnown RBP16.84■□□□□ 0.29
HOXA9-202ENST00000396345 DAZAP2Q15038 168 aaPredicted RBP16.84■□□□□ 0.29
HOXA9-202ENST00000396345 PPA1Q15181 289 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 HIKESHIQ53FT3 197 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 MESTQ5EB52 335 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 CLEC12AQ5QGZ9 265 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 ANKRD16Q6P6B7 361 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF295-AS1Q8N0V1 137 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 C17orf78Q8N4C9 275 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 BCL2L2Q92843 193 aaPredicted RBP16.84■□□□□ 0.29
HOXA9-202ENST00000396345 BOD1Q96IK1 185 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 RBP7Q96R05 134 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 PKP2Q99959 881 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 PLA2G12AQ9BZM1 189 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 S100A14Q9HCY8 104 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 SLC17A5Q9NRA2 495 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 TBC1D23Q9NUY8 699 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 KIF17Q9P2E2 1029 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 UNC79Q9P2D8 2635 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 CELSR2Q9HCU4 2923 aa16.84■□□□□ 0.29
HOXA9-202ENST00000396345 A0A096LPE4 126 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 A0A1W2PPZ6 126 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 A0A1W2PR80 420 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 SOCS2O14508 198 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 ARPC3O15145 178 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 DHHO43323 396 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 SOX14O95416 240 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 TP53P04637 393 aaPredicted RBP16.83■□□□□ 0.28
HOXA9-202ENST00000396345 CRYGSP22914 178 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 TBRG1Q3YBR2 411 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 THEM4Q5T1C6 240 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 KLHL17Q6TDP4 642 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 SSX8Q7RTT4 187 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 ZDHHC13Q8IUH4 622 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 SVOPLQ8N434 492 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 WDR31Q8NA23 367 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 OR52N5Q8NH56 324 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 FNDC8Q8TC99 324 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 TSSK6Q9BXA6 273 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 REV1Q9UBZ9 1251 aa16.83■□□□□ 0.28
HOXA9-202ENST00000396345 PRR14LQ5THK1 2151 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 NBPF19A0A087WUL8 3843 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 PRSS37A4D1T9 235 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 A6NNC1 897 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 H7C1C5 153 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 IDH3BO43837 385 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 AHCYL1O43865 530 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 SEC14L2O76054 403 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 SLC2A10O95528 541 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 HOXB1P14653 301 aaPredicted RBP16.82■□□□□ 0.28
HOXA9-202ENST00000396345 NOS3P29474 1203 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 ZNF84P51523 738 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 ZNF133P52736 654 aaPredicted RBP16.82■□□□□ 0.28
HOXA9-202ENST00000396345 LCN6P62502 163 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 FMODQ06828 376 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 SLC36A3Q495N2 470 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 C10orf128Q5T292 105 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 FAHD1Q6P587 224 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 SLC25A47Q6Q0C1 308 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 KLHL24Q6TFL4 600 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 ZNF813Q6ZN06 617 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 ADCK1Q86TW2 530 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 ICA1LQ8NDH6 482 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 OR8D4Q8NGM9 314 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 STMN2Q93045 179 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 NMD3Q96D46 503 aaKnown RBP16.82■□□□□ 0.28
HOXA9-202ENST00000396345 C14orf79Q96F83 325 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 FOXB1Q99853 325 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 NELFAQ9H3P2 528 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 SMURF2Q9HAU4 748 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 AMDHD2Q9Y303 409 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 SLC25A15Q9Y619 301 aa16.82■□□□□ 0.28
HOXA9-202ENST00000396345 SLC22A23A1A5C7 686 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 H3BN98 237 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 BHLHE40O14503 412 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 WNT11O96014 354 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 SSTR2P30874 369 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 DAPP51397 102 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 UBE2NP61088 152 aaKnown RBP16.81■□□□□ 0.28
HOXA9-202ENST00000396345 TLE4Q04727 773 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 C1QTNF12Q5T7M4 302 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 ZNF627Q7L945 461 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 JAZF1Q86VZ6 243 aa16.81■□□□□ 0.28
HOXA9-202ENST00000396345 TEX47Q8TBZ9 253 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms