RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 HPNP05981 417 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 CELA3AP09093 270 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 CSF3P09919 207 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 RFPL3SP0C7P2 107 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 LIMS3P0CW19 117 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 LIMS4P0CW20 117 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 SPNP16150 400 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 RBM34P42696 430 aaKnown RBP9.34□□□□□ -0.91
COL5A1-202ENST00000371820 RFX3P48380 749 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ATP12AP54707 1039 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 PSMD4P55036 377 aaKnown RBP9.34□□□□□ -0.91
COL5A1-202ENST00000371820 CHRNEQ04844 493 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF155Q12901 538 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-202ENST00000371820 MRPL28Q13084 256 aaKnown RBP9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF79Q15937 498 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 EMC4Q5J8M3 183 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF613Q6PF04 617 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 TMPRSS11FQ6ZWK6 438 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 CXXC5Q7LFL8 322 aaKnown RBP9.34□□□□□ -0.91
COL5A1-202ENST00000371820 NOXA1Q86UR1 476 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 LAX1Q8IWV1 398 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF619Q8N2I2 560 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 Q8N402 240 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 OR5D16Q8NGK9 328 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 C15orf40Q8WUR7 153 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 SLC7A6Q92536 515 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 KAT2AQ92830 837 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 HGDQ93099 445 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 VSTM2LQ96N03 204 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 SPOCK3Q9BQ16 436 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ACTR6Q9GZN1 396 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ENKD1Q9H0I2 346 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 SLC6A15Q9H2J7 730 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 PPP1R3EQ9H7J1 279 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 KCNJ16Q9NPI9 418 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 TIGARQ9NQ88 270 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 C14orf119Q9NWQ9 140 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ALKBH4Q9NXW9 302 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 HAO2Q9NYQ3 351 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 TAS2R16Q9NYV7 291 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 SPRR3Q9UBC9 169 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 C19orf53Q9UNZ5 99 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF443Q9Y2A4 671 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-202ENST00000371820 DTX4Q9Y2E6 619 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 NOX1Q9Y5S8 564 aa9.34□□□□□ -0.91
COL5A1-202ENST00000371820 HIVEP1P15822 2718 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 DAPL1A0PJW8 107 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 GNB5O14775 395 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 KLF4O43474 513 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 ICOSLGO75144 302 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 CBR3O75828 277 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 TPPPO94811 219 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 ACTL6AO96019 429 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 CT45A8P0DMV1 189 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 CT45A9P0DMV2 189 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 HK1P19367 917 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 MC3RP41968 323 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 NR4A2P43354 598 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 RFX2P48378 723 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 PNLIPRP2P54317 469 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 RAG2P55895 527 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 KRTAP10-9P60411 292 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 MXD1Q05195 221 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 LGALS3BPQ08380 585 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 PMPCAQ10713 525 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 GALEQ14376 348 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 BAK1Q16611 211 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 TBRG1Q3YBR2 411 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 CT45A2Q5DJT8 189 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 ATAD3CQ5T2N8 411 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 RIPPLY2Q5TAB7 128 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 PYHIN1Q6K0P9 492 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 MFSD12Q6NUT3 480 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF322Q6U7Q0 402 aaPredicted RBP9.33□□□□□ -0.92
COL5A1-202ENST00000371820 TMEM107Q6UX40 140 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF620Q6ZNG0 422 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 KIF18BQ86Y91 864 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 OR2L13Q8N349 312 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 CELF2-AS1Q8N7Q2 184 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF485Q8NCK3 441 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 OR7G2Q8NG99 324 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 LILRB4Q8NHJ6 448 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 CREB3L1Q96BA8 519 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 LRRC46Q96FV0 321 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 ST6GAL2Q96JF0 529 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 TTYH2Q9BSA4 534 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 MARVELD1Q9BSK0 173 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 TRIM2Q9C040 744 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 MIXL1Q9H2W2 232 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 UBQLN3Q9H347 655 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 Q9N2J8 555 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 SDHAF3Q9NRP4 125 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 ABRACLQ9P1F3 81 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 MED31Q9Y3C7 131 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 HRH3Q9Y5N1 445 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 EML6Q6ZMW3 1958 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 EXPH5Q8NEV8 1989 aa9.33□□□□□ -0.92
COL5A1-202ENST00000371820 CPSF4LA6NMK7 179 aaKnown RBP9.32□□□□□ -0.92
COL5A1-202ENST00000371820 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
COL5A1-202ENST00000371820 HSPB2A8KAH6 182 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms