RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 CFAP54Q96N23 3096 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DENND4CQ5VZ89 1909 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 ALPK3Q96L96 1907 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 ZNF705EA8MWA4 302 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 CD2P06729 351 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 TACR3P29371 465 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 CAPZA2P47755 286 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 BDH1Q02338 343 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 HHEXQ03014 270 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 ZNF425Q6IV72 752 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 SEZ6L2Q6UXD5 910 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 ZNF101Q8IZC7 436 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 OR6V1Q8N148 313 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 SLC37A2Q8TED4 501 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 NUDT22Q9BRQ3 303 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 POFUT1Q9H488 388 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 MOKQ9UQ07 419 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 MCRIP1C9JLW8 97 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 KLF4O43474 513 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 THBS1P07996 1170 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 CTRB1P17538 263 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 PRKXP51817 358 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 CXADRP78310 365 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 PSG6Q00889 435 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 CTRB2Q6GPI1 263 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 ZCCHC12Q6PEW1 402 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 C16orf52Q8NHV5 167 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 GPR119Q8TDV5 335 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 ZNF75AQ96N20 296 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 FAM83CQ9BQN1 747 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 TBL1XR1Q9BZK7 514 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 IFT46Q9NQC8 304 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 GPR160Q9UJ42 338 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 FOXJ3Q9UPW0 622 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DHDHQ9UQ10 334 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 FREM3P0C091 2139 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 A0A1B0GW55 424 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 OIP5O43482 229 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 SUSD5O60279 629 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DUX4L2P0CJ85 424 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DUX4L3P0CJ86 424 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DUX4L4P0CJ87 422 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DUX4L5P0CJ88 424 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DUX4L6P0CJ89 424 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DUX4L7P0CJ90 424 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 VSIG10L2P0DP72 767 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 ERGP11308 486 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 IFNGR1P15260 489 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 PRAMEF8Q5VWM4 474 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 PRAMEF7Q5VXH5 474 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 FAM199XQ6PEV8 388 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 MRGPREQ86SM8 312 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 ESX1Q8N693 406 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 STEAP2Q8NFT2 490 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 KTI12Q96EK9 354 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 OR11A1Q9GZK7 315 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 PCDHB16Q9NRJ7 776 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 DUX4Q9UBX2 424 aa12.12□□□□□ -0.47
TNFRSF21-201ENST00000296861 C17orf105B2RV13 164 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 AKR7A3O95154 331 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 FARS2O95363 451 aaKnown RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 HOXD4P09016 255 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 NTSR1P30989 418 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 MC2RQ01718 297 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 ZNF169Q14929 603 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 RBMS2Q15434 407 aaKnown RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 RAB11BQ15907 218 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 TMEM196Q5HYL7 178 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 FCRL6Q6DN72 434 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 GLDNQ6ZMI3 551 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 SLC25A44Q96H78 314 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 AMELYQ99218 206 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 DNAJB12Q9NXW2 375 aaKnown RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 PRR13Q9NZ81 148 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 DHCR7Q9UBM7 475 aaKnown RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 CYP8B1Q9UNU6 501 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 PCDHGA9Q9Y5G4 932 aaKnown RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 SERINC4A6NH21 518 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 SLC2A1P11166 492 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 NR0B1P51843 470 aaKnown RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 H2BFSP57053 126 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 PRICKLE4Q2TBC4 344 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 HACD4Q5VWC8 232 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 STEAP1BQ6NZ63 245 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 C3orf33Q6P1S2 294 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 ATRAIDQ6UW56 229 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 ZFP82Q8N141 532 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 OR2AK2Q8NG84 335 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 PAQR8Q8TEZ7 354 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 PARP12Q9H0J9 701 aaKnown RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 FRRS1LQ9P0K9 344 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 ZNF337Q9Y3M9 751 aa12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 COL4A4P53420 1690 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF21-201ENST00000296861 H3BML4 177 aa12.1□□□□□ -0.47
TNFRSF21-201ENST00000296861 PRAF2O60831 178 aa12.1□□□□□ -0.47
TNFRSF21-201ENST00000296861 PPM1BO75688 479 aa12.1□□□□□ -0.47
TNFRSF21-201ENST00000296861 MPZL1O95297 269 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms