RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SLC31A1O15431 190 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 RCBTB2O95199 551 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 MGMTP16455 207 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 PON3Q15166 354 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 CCDC157Q569K6 752 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 CDPF1Q6NVV7 123 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 MOB3CQ70IA8 216 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 FAM86C1Q9NVL1 165 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 TMEM82A0PJX8 343 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 CACNB4O00305 520 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-227ENST00000640957 OLFM2O95897 454 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 HIST1H1TP22492 207 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-227ENST00000640957 PSRC1Q6PGN9 363 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-227ENST00000640957 PPP1R3BQ86XI6 285 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 TMEM151BQ8IW70 566 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 DND1Q8IYX4 353 aaKnown RBP12.54□□□□□ -0.4
SCARB2-227ENST00000640957 TCEAL3Q969E4 200 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 HAVCR1Q96D42 359 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 WDR34Q96EX3 536 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 MRPL48Q96GC5 212 aaKnown RBP12.54□□□□□ -0.4
SCARB2-227ENST00000640957 RHOVQ96L33 236 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 TRPM6Q9BX84 2022 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 A0A0A6YYD5 115 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 NAP1L6A6NFF2 107 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 PAPLNO95428 1278 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 PRNPP04156 253 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 PI3P19957 117 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 DEFB134Q4QY38 66 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 ELFN2Q5R3F8 820 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 STEAP1BQ6NZ63 245 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 ASPGQ86U10 573 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF676Q8N7Q3 588 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 OR5K2Q8NHB8 316 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 ARRDC3Q96B67 414 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 LRRC3BQ96PB8 259 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 FAM117AQ9C073 453 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 LAT2Q9GZY6 243 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 KRCC1Q9NPI7 259 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-227ENST00000640957 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 hCG_1809904A0A1W2PP81 198 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 A0A1W2PR64 198 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 A0A1W2PRV1 198 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 METTL21EPA6NDL7 271 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 ELOA3DA6NLF2 546 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 EIF4E2O60573 245 aaKnown RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 LILRB5O75023 590 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 UBBP0CG47 229 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 UBCP0CG48 685 aaKnown RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 CD34P28906 385 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 GAS6Q14393 721 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 ELOA3BQ3SY89 546 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 C2orf27AQ580R0 203 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 ABHD13Q7L211 337 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 RANBP3LQ86VV4 465 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 ELOA3Q8NG57 546 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 CGGBP1Q9UFW8 167 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 SPTBN5Q9NRC6 3674 aaKnown RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 MPDZO75970 2070 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 DCDC2BA2VCK2 349 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 RNF222A6NCQ9 220 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 FBXO24O75426 580 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 RAB3DO95716 219 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 SERPINA5P05154 406 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 GALP22466 123 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 CALCRP30988 508 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 SDHAP31040 664 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 POU3F4P49335 361 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 HABP2Q14520 560 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 PEA15Q15121 130 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 GFOD2Q3B7J2 385 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 TMEM31Q5JXX7 168 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 OR52W1Q6IF63 320 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 ADAM5Q6NVV9 412 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 OVCH1Q7RTY7 1134 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 KRT77Q7Z794 578 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 RTN4RL2Q86UN3 420 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 CMBLQ96DG6 245 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 PITHD1Q9GZP4 211 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-227ENST00000640957 RPS10P5Q9NQ39 176 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 PPIL1Q9Y3C6 166 aa12.53□□□□□ -0.4
SCARB2-227ENST00000640957 A0A1B0GW55 424 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 GLSO94925 669 aaPredicted RBP12.52□□□□□ -0.4
SCARB2-227ENST00000640957 F13BP05160 661 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 SNRNP70P08621 437 aaKnown RBP12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DUX4L2P0CJ85 424 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DUX4L3P0CJ86 424 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DUX4L4P0CJ87 422 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DUX4L5P0CJ88 424 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DUX4L6P0CJ89 424 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DUX4L7P0CJ90 424 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 RPA2P15927 270 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 CD1CP29017 333 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 CCKBRP32239 447 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 FRKP42685 505 aaPredicted RBP12.52□□□□□ -0.4
SCARB2-227ENST00000640957 RPS27AP62979 156 aaKnown RBP12.52□□□□□ -0.4
SCARB2-227ENST00000640957 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DHRS2Q13268 280 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 LIPNQ5VXI9 398 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 SLC35D2Q76EJ3 337 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms